Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT128096
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Entry
AGABI1DRAFT128096 CDS
T03136
Symbol
AGABI1DRAFT_128096
Name
(RefSeq) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03013
Nucleocytoplasmic transport
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT128096 (AGABI1DRAFT_128096)
09122 Translation
03013 Nucleocytoplasmic transport
AGABI1DRAFT128096 (AGABI1DRAFT_128096)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT128096 (AGABI1DRAFT_128096)
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT128096 (AGABI1DRAFT_128096)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AGABI1DRAFT128096 (AGABI1DRAFT_128096)
Spliceosome [BR:
abp03041
]
Complex C
Other components
EJC/TREX
AGABI1DRAFT128096 (AGABI1DRAFT_128096)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AGABI1DRAFT128096 (AGABI1DRAFT_128096)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
18826753
NCBI-ProteinID:
XP_007329574
JGI:
Agabi_varbur_1_128096
UniProt:
K5XBE6
LinkDB
All DBs
Position
Unknown
AA seq
2081 aa
AA seq
DB search
MNVIDAVRRCIGSWSKGGESECRSLVAQTLCDSNNLEIVTTAYHTLLTSVLSTWSPPQSF
SQNQFIDFIKSVYDALPSTSSSQSGSCVNIFEDQLIDMIWSVDAALDEILSDAKVDSNGG
DATALDATGKTKARKKEEAERDKEILQTIVKRLLEIRVITPELCRERLELSVLAKVGLIT
DETMMAKKEIRMRTGLFYKQNKFNLLREQSEGYSKLVIELTSNMGPAHSSTTGLPTESYK
DMHARASNVWGKVISLIGKFDLDPNRALDLILDVLSSNLTTHYTFFLALLSFSPWAASYR
RPSDPVASDIAMDVDSDPPIAVSYKCKSLDEILAMAEINSPNGGDISSLHGARVLSQVLG
FKFTLYQVPEIADTTPKSLYLTAAILIRERFVSLEDVYSHLSPSDEDMEMTRKEYLANVQ
SRIAGAKSSLLAMAAPLEAGPSSQPKAKAAAPHENKKIEVKNTNQKMGLLHALLSVGALR
PAFAILSKFPWAVDVYPELADLVLRVLKYTLDPFFDTMANKQRNSNFMKPRARYGPSGVI
QPSIRKPVLTLWAPTPPSTSNTDFVFFFPDWADRVPMMTTLDDLENLVEPILHFVGIHVS
RDPSFLSKFLRLGRQHLQPTNPPIDPQTKRFIGTADPTNPIRVFWFKILRNYLIPGLPLI
RSNAVCTVEIWSIIRHFPLEARWQLYGEWKDRVYKSHPELKIRQVQADRESKGILRRLSH
NTIDALAGSVAKLAHSNPCIFFQNAVNQIMAYDNLASVVIQALRYVTNMGFDVLVFIALD
ALANPYKQRLKDDGVNTTDWLQSLASFIGMLFRRYSAELYPVLSYVAHQLQSGQTSEIVV
LRELIWKMAGIQPLPSLSEGQIAAMAGGPILRIEAVASETRGSRLDSSDFNLRAPQRLGK
SLLEPPSLALPLLVQVAQQRQACVFKAHDAHIKSLASLFDATHGVLLQYLELLTSPLSIS
PEVYATKVLPPLGDLGEKYGLCAPICMQIYRPVWHVNLLKQVLAPPDQDSEEVEKRLKAA
LTAKREPSANSRIASPVTGAPASTLDTPDTKTAVNEIVPVESVNSTDMGGKGEASQPPES
PWLPELAQHFEDLPKIAPGSANDVIGPGFYFTFWQLSMYDLAPPASRYAEEGATLRTLSR
QEDSKYIAADRSSDRARRATATLHRQRRDRFNSYANLLAEELKEQSASRQFTITRLAREK
LHWFLPVTKPGLLITCIIEHCIQPRCLLSPMDADFCAQFIKVIHTIGTPGFHTLAMYDKL
LGDHVKVVLFSCSEYEARNYGRFLRGIMTDLYSWFKDKQLYEQDNQINRNNQTLCHPGFK
RNFTNKPNDVLKHEALQTVVRKWHRKLGKSFVDCVQTEEYMHVYNAIIVLKEILPVFPLA
TVAPDTGPAINTAIDQLLEKEERGDLKILGKAYSASLKKREHYWVMNKTAQKVNGVVAPR
SSTHTPQPVPDKPRNGPPTGPHSQNGGASIPPRPSHGPTSTPSGPRAATQPMSHSSTPTQ
PTVVAPVPEKPAEIAASNQLASKIPVENIPRPEVVRRVRAEARDSPRHSPAPAKMDVVND
NRSVSTPPPRSLENLSVPTGPGNRRSPILHTDAPRPNLPAPPHQQSGPGAETLRPSRSSE
TNMPPPSVPSQTPSAQELRESARMTLPRVEKSDSQQGHSGSAAPSPRPRSLSPVSRPGTR
APSNDSRGSGGRTRTDDSKRPERDGREHGASIARRDSLTHNRSERSGRERGRDRDGDREE
RERERDRGRDRHGHGDREREKGGERDRERDRERDRDRDRHRRDEKDRDRDRKESRSQPSG
TTTPVIDERNTPTRPDPRHRNGNVSSEDTLGKRRRPTEDDPERGSKRSTRRESHRDERSR
RPPEKEDRERESERKRKERDGHDSDSRGSIPNKPTSEKKIPDAPKGRVPAAPSAPRAMAG
GGNGTGERNSKGEISSGRDRHRDVRDPPKGPPLNAPTAPDPSRVPSSLRSRISETESGLS
HPPPQGPRSGEGTSSARREDDRENGGRKRTVSVWGTEREKDAHEPPSGPAETNPQKRIRI
NRNRYPSQPSPSNASNNSHGFARKVLPIDPAAGDRSRGRQD
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcatcgacgccgtacgcaggtgcataggaagttggtctaagggtggagagtct
gaatgtcggagtctcgtcgcgcaaacgctttgcgactcaaacaatctggaaattgtcacc
accgcataccacacactcttgacgtctgttctttccacatggtccccgccacaatcgttc
tcgcaaaatcagttcattgactttatcaagtctgtctacgatgctctaccttcgacatcg
tcctcgcagagtggctcttgcgtgaatatattcgaggatcagctcatagacatgatatgg
tcagtggatgcagccttggacgaaatactttcggatgccaaggttgactcgaatggtgga
gacgccacagccttagacgccacaggcaagacgaaggctcggaaaaaagaagaagcagag
agagacaaggagattctgcaaaccatcgtcaaacgacttcttgaaattcgggttatcact
ccggaattatgtagggagcgcttggaacttagtgttctcgcaaaagttgggctcatcact
gatgaaactatgatggcgaagaaagagattcggatgagaacgggacttttctacaagcag
aacaagtttaatcttttacgagagcaatccgagggatacagcaagcttgtcatcgagctg
accagcaacatgggacctgctcattcttcgacaactgggttgcctaccgagagctataag
gacatgcatgctcgcgcgagcaacgtttgggggaaagtgattagccttattgggaagttt
gaccttgaccccaacagagcattggacctcatactggacgtgctctcgtccaacctaaca
acccattatactttcttccttgcgctactctcgttttctccgtgggcggcttcataccgg
cgaccttctgaccctgtagccagtgatattgccatggatgtcgattctgatcctccaata
gccgtgtcatacaaatgcaagagccttgacgagatattggccatggctgaaattaattct
cccaacggcggggatatctccagtctccatggtgccagagttctctcacaagttctaggt
ttcaagttcaccctttaccaggtcccggaaattgcggatacaactcccaaatctttgtat
cttacggctgctattctaatacgtgaaaggttcgtttcattggaggatgtatattcacat
ctctcaccttcggacgaggacatggagatgacgcggaaggagtatctcgccaatgtgcag
tccagaattgcgggggcaaagtcaagtttactggctatggccgcacctttggaagctggt
ccatcttctcaacccaaggctaaggctgcagcgcctcacgagaacaaaaagatcgaagtg
aagaatacgaatcagaaaatggggctgctccacgccctgttatctgttggcgccttacga
cctgccttcgcgatccttagcaaattcccgtgggctgtagacgtttatcctgaactagcc
gacttggttttacgcgtgctcaagtatactctcgatccgttcttcgatactatggcaaat
aagcaacgaaactccaatttcatgaagcctcgtgctcgatatggtccatctggtgtcatc
cagccgtctatccgcaagcccgtgctgacgctttgggctcctacgcctcccagtaccagc
aacacggattttgttttcttttttcctgattgggcagacagagtacccatgatgactacc
ttggacgacctggagaatttggttgagcccatactacattttgttgggatccatgtttct
cgggatccgtcatttttatcgaagttcctgcgactcggacggcaacatttgcaacccacg
aacccccccattgatccacaaaccaaaaggtttatcggtactgccgatccgaccaatccc
atccgagtattctggtttaaaatcttgcgtaactatctaatccccggacttcccctcatc
cgtagcaatgccgtttgcacggtggaaatctggagtattatccgtcattttccgttggag
gcccgttggcaactttatggcgaatggaaggatcgagtgtataagagccacccagagctt
aagattcgtcaagttcaagccgacagagaatcgaagggcatcctcagacgtctatctcac
aacaccattgatgctcttgctggttctgtggcgaagcttgcccactcaaacccttgtatt
tttttccagaatgcagtaaaccagatcatggcatatgacaatcttgcaagtgtagtgatc
caggctctgcgttacgtcacaaatatgggctttgacgtactggttttcattgcattggat
gccctcgcaaacccttacaagcaacggctgaaggatgatggagtcaatacgacagactgg
ttacaaagccttgcttctttcatagggatgttgttccgccgctacagcgctgagctgtat
ccagtactcagctatgttgctcatcaattgcaaagtggtcagacttcggagatcgttgtt
cttcgcgagctgatatggaaaatggctggaatccaacctctaccgagcttatccgagggg
cagattgcggctatggctggaggccctatcctccgcattgaggcagttgcatcagaaact
cgcggatctcgcttggatagtagtgacttcaacctgagggctcctcagagattgggtaaa
agtctgttggagccaccttcattagctttgcctcttcttgtccaagtcgctcagcagcga
caggcctgtgttttcaaagcacatgatgctcacataaagtcactggccagtcttttcgat
gccacgcatggcgtactgctacagtatctggagttattgacatctcctctatcaatctcc
ccggaagtctacgcgaccaaagtgttacccccgttgggcgatttgggagaaaaatatgga
ctatgtgcaccaatttgcatgcagatataccgacctgtttggcatgtgaatttgcttaaa
caagtcctagctcctccggatcaggattcggaggaggtagaaaagcgattgaaggccgcc
cttactgccaagcgtgagccatctgctaattcccgtatcgcttcgccggtgaccggcgca
cccgcgtccactttggacacgccggacacaaagactgcagtgaacgaaatagtaccggta
gagagtgtaaactcaacagatatgggtggtaagggggaagcttctcagccaccagagagc
ccatggcttcccgagttggctcagcacttcgaagatttaccgaagattgcccccggaagt
gcgaacgatgtcattggccctgggttctatttcactttctggcaactctctatgtacgat
ttggccccaccggcctcccgttacgcggaagaaggcgcgacattgcgtactcttagtcgc
caagaggattcgaagtacatcgctgcagatcgatcctctgatcgtgccagacgggcaaca
gccacgcttcataggcagcgtcgcgacaggttcaattcgtacgcaaacttgttagctgaa
gagttaaaagagcaaagtgcctcgcgacagttcactatcacccgacttgcacgcgaaaag
ctccattggttcttacctgtcacgaaacctggtttactcatcacttgcatcattgaacat
tgtattcaaccgcgatgtcttctttcgcccatggatgctgacttttgtgctcaatttatc
aaagtcattcacacaatagggacaccgggtttccataccctggctatgtatgacaaattg
ttgggtgatcacgtgaaagtagttttattctcctgcagtgaatacgaagctcggaattat
gggcgtttcctgcgtggtattatgaccgacctttacagctggttcaaggataagcagctc
tacgaacaagataatcaaatcaatcgaaataatcagactctctgccatccaggcttcaaa
agaaatttcacaaacaaacctaatgacgttctcaaacatgaagcgttgcaaacagttgtc
cgcaagtggcaccgcaagcttggcaagtcattcgtcgactgtgtccaaaccgaggaatat
atgcatgtctacaatgccattatcgtccttaaggaaattcttcccgttttcccactggcg
actgttgctcctgataccggtcccgctatcaacaccgctatagaccaattactggagaag
gaagaacgtggtgatctgaagattcttggaaaagcttactcggctagtctaaagaagcgg
gagcattattgggttatgaacaaaacagctcaaaaagtcaatggtgttgttgctccgagg
tcttcaacgcatacgcctcagccagtaccggacaaacctcgcaatggaccacccactgga
cctcacagtcaaaatggcggcgccagtatacctccacggccgtcgcatggcccaacttct
accccttctggtccccgtgccgcaactcaaccaatgtcccacagttccacacccacgcag
cccacagtcgtagcacccgttcctgagaagcccgcagaaatagctgcatcgaaccaacta
gcctccaaaatacccgttgaaaacatccctcggcctgaggtggtcaggagagttcgggcc
gaggccagagattcaccgaggcacagtccagcacctgccaagatggacgtagtaaatgat
aaccgaagcgtctccacacctcctccccgctccttagaaaacttgtctgtacccaccggg
cctggtaaccgccgtagtcctattcttcataccgatgcgccacggccaaacctacctgct
cctccacaccaacagtccggccctggtgcagagactttacggccatcacgctcttccgag
acgaacatgccaccaccctctgtgccgagccaaacgccatcggctcaagaactgcgtgaa
agcgcgagaatgacacttcctcgtgtagagaaatctgattcacagcagggccatagtggg
tcggctgcaccttctcctcgtccaagatcactttcgcccgtaagtcgaccggggacacgc
gcccccagcaacgacagcaggggcagtggtggtcgtactcgaacagacgactcaaaacgg
cctgagagagatggtcgtgaacatggtgcgagcatcgcaagacgagatagtttgacgcat
aataggagcgaaaggagtggtagagaacgaggaagagatagggatggagacagagaagaa
agagaacgcgaaagggatagaggaagggatcggcatggtcatggagatcgagaacgcgag
aaaggcggggagagagatagagagcgagatagggagcgcgaccgggacagagaccgccac
cggcgagacgaaaaggaccgcgatcgcgaccggaaagaatcgagaagtcaacctagtggt
actaccactcctgtcattgatgagcggaatacgcctacgcgtcccgacccgaggcatcgt
aacggcaatgtctcttccgaggacacgcttggaaaacggcgtcgtccgactgaagatgat
cccgagcgaggatccaaacgcagtacacgcagagagtcacatcgtgacgagcgtagcaga
cgcccgcctgaaaaggaggacagagaacgggagtcggaacgaaaacggaaagagcgagat
ggacatgacagcgatagtcgcggttccatccccaacaaacctacttccgagaagaagatc
ccagatgctccgaaaggacgagttcctgcagcgccttccgctccgcgcgcaatggccggt
ggcgggaatggcacaggcgaacgcaatagcaaaggcgagataagctctgggcgagaccgg
caccgggacgttcgtgacccacctaaaggaccaccactcaatgctccgacggcacctgat
ccctctcgggtcccaagtagcctaaggtcaagaatcagtgagactgaatccggactatcg
catccaccgccccagggtcccaggagtggcgaaggaacttcttcagcgaggcgtgaagac
gatcgggaaaatggtgggaggaaacgtacggtctctgtttggggtacagagcgggaaaag
gatgcacatgagcctccctcgggccctgcagagacgaaccctcagaagagaattcgtatc
aatcgcaatcgatatcccagtcaaccgtcgccgtcgaatgcgtcaaataattcgcatgga
tttgcacgcaaggtgttgccaatcgatcctgccgctggtgataggagccggggaagacag
gattga
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integrated database retrieval system
