Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT57683
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Entry
AGABI1DRAFT57683 CDS
T03136
Symbol
AGABI1DRAFT_57683
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT57683 (AGABI1DRAFT_57683)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT57683 (AGABI1DRAFT_57683)
Enzymes [BR:
abp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AGABI1DRAFT57683 (AGABI1DRAFT_57683)
Spliceosome [BR:
abp03041
]
Complex A
U2 snRNP components
U2 related factors
AGABI1DRAFT57683 (AGABI1DRAFT_57683)
Complex B
AGABI1DRAFT57683 (AGABI1DRAFT_57683)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NuDC
Motif
Other DBs
NCBI-GeneID:
18830221
NCBI-ProteinID:
XP_007328927
JGI:
Agabi_varbur_1_57683
UniProt:
K5W082
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MDDSVETKRKLETLGDMPAVDMSMKDDATVGDLEVDDDDEEANRMDQALKAKAKDTMEVA
EEDEVDPLDAFMSGVKEEVKKVNLEDMQKMITTNGLQSRVRLDDQMGDDGVEAEVEGTVD
ELDATELNPEDILALAAKKAKKKELATVDHSRIHYEPFRKEFYVPPPDIAHMTDDEAELL
RLELDSIKIRGIDCPRPVTKWSHFGMPANCLDVIKRLNYTAPTSIQAQAIPAIMSGRDVI
GVAKTGSGKTIAFLMPLFRHIKDQRPLEQMEGPIAVVMTPTRELAVQIHKDCKPFLKVLG
LRAVCAYGGSPIKDQIAELKKGAEIIVCTPGRMIDLLTANSGRVTNLKRVTYVVLDEADR
MFDMGFEPQVMKIVNNTRPDRQTVLFSATFPKQMDSLARKILRKPLEITVGGRSVVAAEI
EQIVEVRAEDTKFNRLLEILGQMYNEDPECRTLIFVDRQEAADNLLRELMRKGYLCMSLH
GGKDQVDRDQTIADFKSGVVPIVIATSVAARGLDVKQLKLVINHDAPNHMEDYVHRAGRT
GRAGNKGTCVTFITPEQDRYSVDIHRALKASNASIPQELEDLANGFLEKVKSGKAQAAGS
GFGGKGLDRLDKERDAREKAERKAYGEPTDEDKPEAIAPAGAAAKVENAGVVSNDDMNFG
NFKVEIKRGPAPDSSKGLLGVSGAVAAARRLAHAKEEERIQSQMRAAEEAAARAGKDTPA
HKQALNVVAKLNAQLRASKLVLQSQLQAEESGRKINPDSTDFHAIIPINDYPQKARWRVT
NKETMTQLIDMTGASVTNKGIYYETGKEPPAEGPPKLHLLIESNEEYRVEQAVREIKRLL
IEASAAAIQAEMRNPTATGRYSVL
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggatgattctgtagaaacaaagcgcaaattagagactttgggggatatgcccgccgtt
gacatgagcatgaaggacgacgcgactgttggtgacctagaagtagatgatgatgacgag
gaagccaacagaatggaccaagcattgaaagccaaggcgaaagataccatggaagtcgct
gaagaggacgaagtcgatcctctcgatgccttcatgagtggggtcaaagaagaggtcaag
aaagtgaatctggaagacatgcagaaaatgataactaccaatggccttcagtctcgggtt
cgtttggatgaccagatgggagatgatggcgtggaggccgaagtagagggtaccgttgat
gaactcgatgcaacggaactcaatccggaggatatcctcgctctggccgcaaaaaaggcg
aaaaaaaaagagttggccacagtcgatcattcacgtattcattatgagccgttcagaaag
gaattttatgtccctccacctgatatcgcacatatgactgacgatgaagctgaattactg
cgccttgagctggacagcatcaaaatccgtggtattgattgccctcgccccgtcacaaaa
tggagccattttggcatgcctgccaactgtctcgacgttatcaagcgcttgaattatact
gccccgacatctatccaagcccaagccatacctgccatcatgtctggccgagacgttatt
ggtgtagccaagactggttccggtaaaacaatcgcctttctaatgcccttattccgtcac
atcaaggaccagcgtcctctcgaacaaatggaaggccccattgcagtcgtcatgactccg
acacgcgagttggctgtccagattcacaaagattgtaagccctttttgaaagtattgggt
ctacgggctgtatgtgcatacggcggttcgcctatcaaggatcaaattgcagaacttaaa
aagggagctgaaatcatcgtctgcacacccggtcgcatgatagatttgctgacggccaat
tcaggtcgcgtcaccaatctcaaacgggtgacttacgttgttcttgacgaagctgaccgt
atgttcgacatgggcttcgagccacaggtcatgaaaattgtcaataacacacggcctgat
agacaaaccgtccttttctctgcaacctttcccaaacaaatggattcgcttgcgcggaaa
attttacgaaagccccttgaaattactgtcggtggcagatcagttgttgcagccgaaatt
gaacaaattgtcgaggtccgtgcggaggacactaaattcaatcggcttctggaaattctt
ggccaaatgtataacgaggatccagagtgtagaaccttgatctttgttgaccgacaagaa
gctgctgataaccttctccgagaacttatgcgcaaaggctatctctgcatgtcgcttcat
ggggggaaggatcaagtagaccgtgatcaaactatcgcagatttcaagtctggcgtcgtc
cccatcgttatcgcgacttcagtagctgctcgtggtctggacgtgaagcaacttaaattg
gtcattaatcatgatgctccgaaccacatggaagactatgttcatcgcgctgggcgtacg
ggtcgcgctggtaataagggtacatgtgttacatttattacacccgaacaggatcgctat
tcagttgatattcatcgcgctctcaaggctagtaacgcctcaattccgcaagaattagag
gacttggcaaacggtttcctcgagaaagtcaaatcagggaaagctcaggctgctggttcc
ggatttggtggaaagggcttagatcgactagataaagaacgtgatgcccgcgaaaaggca
gaaaggaaagcatatggcgagccaacagatgaagacaagcctgaagcaattgcccccgcc
ggggcagcggccaaagtagaaaacgctggtgttgttagtaacgatgatatgaactttggc
aacttcaaggtcgaaatcaagcgtggtcccgcaccagattcatctaaaggccttttggga
gtctcaggagcggtcgctgctgcgcgtcgccttgcacatgccaaggaggaagagagaata
cagagtcagatgcgcgcggctgaagaagctgctgctcgtgcaggcaaagatactccagct
cataagcaagctttgaatgtagtggcgaagttgaatgcgcagcttagagcatcgaaattg
gtgttacagtcacagttacaagcggaggaatctgggcgcaagatcaatcccgattcaact
gatttccatgccatcatacccatcaatgattatcctcagaaagcccgttggcgtgttacc
aacaaggagaccatgacccagctcatcgacatgactggtgcttcagttactaataaaggt
atttattatgaaactggaaaagagccaccagccgagggaccgcccaaactccatctactt
attgaatcaaatgaagaatacagggttgagcaagcggtacgcgaaatcaagcgtctactc
atagaagcgtctgctgctgccatacaggcagaaatgcggaacccaacggcaactggcagg
tatagtgttctctaa
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