Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT70360
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Entry
AGABI1DRAFT70360 CDS
T03136
Symbol
AGABI1DRAFT_70360
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AGABI1DRAFT70360 (AGABI1DRAFT_70360)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT70360 (AGABI1DRAFT_70360)
Enzymes [BR:
abp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AGABI1DRAFT70360 (AGABI1DRAFT_70360)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
AGABI1DRAFT70360 (AGABI1DRAFT_70360)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Forkhead
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
Motif
Other DBs
NCBI-GeneID:
18830874
NCBI-ProteinID:
XP_007327284
JGI:
Agabi_varbur_1_70360
UniProt:
K5X1Z9
LinkDB
All DBs
Position
Unknown
AA seq
1918 aa
AA seq
DB search
MQPTPAPSIPPQFDSNVPEYLPPPQNVDSAPFAVLAGLFEKLSTERKQDRRKKLLDAWFT
HWRREKGYDLYPVLRLLLPQKDRERAVYGLKEKNLAKTYIKLIPLGMRDPDAIRMLNWKR
PTEREKSSGDFPAVLYEVISKRSSVIEGSLSVDELNNILDELAQNMGKQDVQSKILQRIY
NKSTAEEQRWIIRIILKDMQISVKETTVFSVFHPDAQDLYNTCSDLKRVACELWDPSFRL
NVQDKMVQLFHTFAPMLSKRPTRKLEDTVREMGGLEFIIEEKLDGERMQLHKRGNEYYYS
SRKGKDYTYLYGKHVGTGSLTPHIDKAFDSRVDDIILDGEMLVWDPVTERNLPFGTLKTA
ALDKTQADINPRPCFKVFDLLYLNGQSLIHKPLTFRKRNLKHCITQVKGRIECVAEFKGT
TAKDIRERMEEVMAARGEGLIIKHPLSKYTLNGRIMDWIKVKPEYMDNMGETVDLLVVAG
NYGTGKRGGGVSTLICAVFEDRGIDEDDDEPKYSTFVRIGSGLSYADYVWIRAKPWKVWN
EQQNPSFLLTEKHSHEDKGDLFLEPEDSFIVKIKAAEIVPSDQYYMGFTMRFPRAMSIRD
DLTIADCMTASAVLEGMKTERKRKMESDITGLHPKRSAKKRKKATIIPQYQGPNLKNVSI
ESNIFDGMKFVVMSDPKSRSGDRVRRDLMKLIHANGGMCAQIVKPETFVIYGGTVMPYDL
KLVVQKNINDVIKPSWIKDSISLGEIAPFHHKYFFHATPGRKHEIDYDEGGEEETMEEDT
SEAVGFSDNAEAMRVESRETSEQKESDLEDLDPDLAEWFRGGKASDGGVARGVESETEAE
SDNDSDNVDVADEEGDEFKDDWELVKSGEHTTDSEDVQDVKMGETDEAMAYDENLIFKHL
CFYLDSPMNARRNEMEVKSKHEEAITGRKKRLEKIAELIIANGGKIVGLHEDKLTHVVLD
KRDITRRIELIKATSQPKRRHLVICEFIEACIEENTLLDEDVRVSNVYEMSGEGDETLGE
NVGVDPYPDVPCRAMANPQVSPISQLLLTLGITREDLSKRSDQMRQFLNPEQTTPSRVVD
RDAHHRSRSNSDLPSRLRSSSTSSSIARSISRNSSTSFRDSTPPITPIKSEVFDNGVPAR
QYNSMELVIERQRRQNKKERRTRKERERELSRNAPNPPSPSPSNTSSQPSVSLDSFMQSR
DGGRALLADDEDGALPIITPKQSIAPVTPQKSKYYREHTEFNSTSRPGEEITRKIETPTS
ARMLSASNPQSISHHQYYPYSAYGSYVSFSQDAGASTSTLPVTPQAKRTHLKVFKSPLPP
SSPPPSSPPSSPSCAINLVSSPGPIGPAPQEEEYDNLPYTLPPGPYSTNKPDLSYAALVG
QAILSSPEHRLTLQEIYDWITIVYPYFKRGETTWMNSIRHVLSTTVCFRKVPRDRSVGRT
QWAIWDEDLECFKGGNFRKHLCKDYMKQAAAKDKQTKGKSRVRKRTDTDDADLRKSKRPR
KDQVSSPLVASVNSQYPASFAPLFPPTRPTPHHQPYYQSCLSQTPNLPADIIFPPLPAAS
AFNRVLNRRNENAPQSSASSSTSSNRAISPPQTISSSSYGTPTSSASSVPGLTPNRQSSS
SPSMPATSDMDVEGANSVCTVAGADSQQGESEQIDGDDVLPLSGGTTLKPVRFWSEPNKS
NALEPGIKLLDSSHVVPEDEDSLLKSKKESQRAVSATQFPPFLLYPTSPTPERRAVDTIP
PVSNAEAGPSNQPRTPTPSTPPSGHTNLSSFHTPLSHKGLHMSPTASLAHYKTNLEPPPV
IPFDSEGESDPLRTPRKRKTSLDGLLGNPTTPRKMFNPNAIDSPYRTPNGFQASPFSRTP
RARPILDPQDPRTLLDDELNRMGTLSDSPGGLFGKSRSSLLYDSPGALDLPGKYRTWW
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaacaccggccccttcaattccacctcaatttgattcaaacgtaccagaatat
ctaccgcccccgcagaatgttgacagcgccccgtttgctgtcctcgctggtttgtttgag
aagctttccacagaaagaaagcaagatagaagaaaaaagttgctcgacgcttggttcact
cactggagacgtgaaaaaggatacgacctctatcccgtcttgcgacttctcttgcctcag
aaggatcgagaacgcgcagtttacggtttgaaggagaagaatctcgcgaaaacatatatc
aaactgatccccttgggtatgagggacccagatgccatccgcatgttgaactggaaaagg
ccaacagaacgcgagaaatcgtctggggactttcctgccgtgctttatgaggtcatcagt
aagcgatcctctgtgatcgagggttccttgtctgtcgacgagctcaacaacattctcgat
gagcttgcacaaaacatgggaaaacaagatgtccagtcgaagatcttacagcgtatctac
aataagtctacagcagaagaacagcgatggataatccgcatcattcttaaggacatgcaa
atatcggttaaagaaaccactgtattttccgttttccacccagacgctcaggacctctat
aacacctgctcagatcttaagagagtggcatgcgagttgtgggacccttcctttcggttg
aacgttcaggacaaaatggtacaattgtttcatacgtttgctcccatgttaagcaaacgt
ccaactcgaaagctcgaagatacagttcgagagatgggcggtttagagtttatcatcgag
gagaaactcgatggggagcggatgcaacttcataagcgaggcaacgaatactactattct
tctaggaagggaaaagattatacctatctttatggtaaacacgtcggtacaggtagcctg
accccccatatcgacaaagctttcgacagtcgcgttgacgacatcattttggatggagaa
atgctcgtttgggacccagtgacggaacgcaacctgccttttgggacactcaagacagcg
gcgttagacaagacgcaagcggatattaacccacggccctgctttaaagtttttgatctc
ctttacctcaatggccagtctctgatccacaaacctctcactttccggaaacgcaatctt
aaacattgcatcactcaggtgaagggtcgcatcgaatgcgtcgccgagttcaagggaact
acggctaaggacatcagggaacggatggaagaggtcatggctgccaggggtgaaggactg
atcataaagcatcctttgtcgaaatatactttgaatggtaggatcatggattggattaag
gttaaaccagaatacatggacaacatgggtgaaaccgttgacctgctcgttgtcgctgga
aactatggtactgggaaacgcggtggaggtgtatccactctcatatgtgctgttttcgaa
gatcgtggaattgacgaagacgacgacgaacccaaatacagtacctttgttaggattggt
tccggactatcgtatgccgactatgtttggattcgtgccaaaccatggaaagtatggaat
gagcagcaaaatccttcatttctactaacggagaagcattctcatgaggacaaaggagat
ctgttcttggagcctgaggactcatttatcgtgaagattaaggcagcggagatcgttccg
tcagatcaatattacatgggcttcacgatgcgatttcctcgagcgatgagcattcgtgat
gatcttactatcgcggactgtatgaccgcatcagctgtactggaaggcatgaagactgag
cgaaagcgcaaaatggagagtgacattactgggcttcatcccaagaggtccgcgaagaag
cgtaagaaggctaccataatccctcagtatcaaggaccgaatctcaagaacgtttctatc
gaatccaatatctttgatggaatgaagttcgtggtgatgtccgatcccaagtcacggtct
ggtgaccgagtccgcagagacttaatgaaactgatacatgccaacggaggtatgtgtgcg
cagatcgttaagcccgaaacgtttgttatttatggtgggactgttatgccgtatgatttg
aagttggtggtacagaagaatattaacgacgtgatcaaaccctcgtggattaaagattcg
atatcgctcggagagatagctccgtttcatcacaagtattttttccatgccacacctgga
aggaagcatgaaattgattacgatgagggcggagaagaggaaacgatggaagaagacacg
tcggaggcggtcgggtttagcgacaatgctgaagcaatgcgggtggaatcaagggagaca
tctgagcaaaaggaaagcgatctagaagatttagaccctgatttggcagaatggtttagg
ggaggaaaggcttccgatggcggggtagctaggggggtcgagtctgaaaccgaagcggag
agtgacaatgactcagacaacgttgatgtagcggatgaagagggagatgagtttaaagat
gactgggaattggtgaagagcggggaacatacgacggattccgaggatgtgcaggatgtg
aaaatgggcgagacggatgaggctatggcctatgatgagaatctgatattcaaacacctg
tgtttctaccttgattccccgatgaacgcgcgtcggaatgagatggaggtgaagagtaaa
cacgaagaagctatcacaggaagaaaaaaaaggctggaaaagatagctgaactcatcatc
gcaaatggtggcaagattgttggtcttcacgaagacaaactgacgcacgtcgtacttgac
aagcgagacataacgcggagaatcgagctgattaaagccacttctcagccgaaacggcgt
cacttggttatctgtgaattcatcgaggcttgtatagaggagaacactctactggatgag
gatgttcgtgtctccaacgtgtatgaaatgtctggtgaaggagatgagactttgggtgag
aatgtcggagttgatccgtacccggacgtgccgtgtcgagcgatggctaacccccaggtc
tctcccatctcccagctcctcctcactcttggcataacgcgtgaggacctcagcaaacgt
agtgaccagatgcgacagttcctcaatcctgaacaaaccaccccttcacgcgttgttgac
cgcgacgctcaccacaggtcgcgctccaactcagatttgccctcgagattaagatcttcc
agcacatcgtcgtccattgctcgttccatctcaagaaacagttctacttctttccgcgac
tccactccccccatcaccccaattaagtcggaagtgtttgacaacggcgtccccgcgagg
cagtacaattcaatggaactggttatcgagcgccaacgtagacaaaataaaaaagaaaga
agaactcgtaaagaaagggaacgcgagttgtcgagaaatgctccaaatccaccttcaccc
tcacccagcaacacgtcttcccaacctagtgttagtttggattcttttatgcaatcgcgc
gacggaggcagggcgcttctcgcagacgacgaggatggggcactgcccatcatcaccccc
aagcaatctatcgcgcctgtcacgcctcaaaagagtaaatattacagagaacataccgag
tttaattccaccagtcgcccgggagaggaaatcactcgaaaaattgagacacctaccagt
gcgagaatgctgtcagcctcgaatccgcaaagcatttctcatcatcaatattatccctac
tcagcctatggtagctatgtatctttcagccaggatgcgggagcttcaacttccaccctt
cccgtgacacctcaagctaagcgtacccacctgaaagtgttcaagtcaccgctacctccg
tcatcaccaccgccttcctcacctccttcttccccatcatgcgccataaatctggtttca
tctccgggcccaatcggcccggctcctcaagaggaagaatatgacaatttaccatacacc
ctcccaccaggcccgtactctacaaacaagccggacttatcatacgcggcgctcgtggga
caagccatcctatcatcgccagagcatcgtttaactttgcaggagatctatgattggatc
accatcgtgtatccgtattttaagcgtggggagacgacctggatgaacagcatccgtcac
gtcttaagtaccacggtgtgttttcgcaaagttccaagggatcgatctgttggtcgcact
caatgggctatatgggatgaagatctagagtgtttcaagggaggcaacttccggaagcat
ttgtgcaaagactatatgaaacaagctgctgccaaggataagcagaccaagggaaagtct
cgggtgcgaaagagaactgatactgatgatgccgaccttcgcaaatctaagcgccctcgc
aaggatcaagtctcatcccccttggtggcatcagttaacagtcaatatccggccagtttt
gctcccctcttcccccctacccgacctaccccacatcatcagccctattatcagtcatgc
ttgtctcaaactcctaatctcccggccgacatcatatttcctcctctccccgccgcgtcg
gctttcaatcgggttttgaataggcgtaacgagaacgcaccgcaatcttctgcaagcagt
tcaacctcttccaacagagccatttccccgccacagactatctcgagttcttcatacggg
acacccacttcctcggcgtcatctgtccctgggctcactcccaaccggcagtcttcaagt
tcaccgtcgatgcctgcgacaagcgacatggatgtggaaggtgcgaactccgtgtgtaca
gtcgcaggagcggattctcagcagggcgaatcggagcagattgacggcgatgatgtcctt
cctctgagtggcggcacgaccttgaagcctgtccgattttggagtgagccaaacaagagt
aatgcgctcgaacccggtatcaagcttctagattccagccacgtcgttcctgaagatgaa
gatagtctcctcaagtcaaagaaagagagtcaaagagctgtttctgcgactcaatttcca
cctttcctcttatacccaacatcacccactcctgaaaggagagcggtggatacgatccct
ccggtgtccaatgccgaggctggaccttccaaccaaccaaggactcccactccgtccacc
cctccctccggccatacaaatctttcatcttttcataccccactgtcgcataagggtcta
cacatgagtccaacagcgagtctggctcattacaagactaatttggagcctcctcctgtc
ataccgttcgacagcgaaggcgagtccgaccctctacgaacgccacgcaaacgcaaaacg
agcttggacggacttctaggcaatcctaccactccaaggaagatgttcaatcctaacgcc
atagattcgccgtatcggacgcccaatggattccaggcttcaccctttagccgaactcct
cgagcaagacctatactcgatccacaagatcctagaacattgcttgatgacgaactaaac
agaatgggaacactctcagacagtcctggagggctatttggcaagagtcgaagttcgttg
ttgtatgatagtccaggcgcgctggatttgcctggcaagtatcgaacttggtggtag
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integrated database retrieval system
