Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT75877
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Entry
AGABI1DRAFT75877 CDS
T03136
Symbol
AGABI1DRAFT_75877
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AGABI1DRAFT75877 (AGABI1DRAFT_75877)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abp03021
]
AGABI1DRAFT75877 (AGABI1DRAFT_75877)
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT75877 (AGABI1DRAFT_75877)
Transcription machinery [BR:
abp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AGABI1DRAFT75877 (AGABI1DRAFT_75877)
RNA polymerase I system
AGABI1DRAFT75877 (AGABI1DRAFT_75877)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
AGABI1DRAFT75877 (AGABI1DRAFT_75877)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
Spt5_N
KOW
Motif
Other DBs
NCBI-GeneID:
18831303
NCBI-ProteinID:
XP_007330879
JGI:
Agabi_varbur_1_75877
UniProt:
K5XTH0
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MSDVEDLNSYDPDMQQPREEEEEEEEEEEESFDKPQKQPARREFEDEEEEEDEEDEEDEE
DEEDSGRKRKKAKHRHRRSAASRFLDIEAEVSDDEEDEDEDEDIGADPFIETGEDMDEDA
ARGHHASLDARRQLAEEEQSPEEIAKNLSRRYAHRAAVRYTGDMNEIPQRLLMPSVQDAS
LWQVRVRPGRERDIVFSIMRKALDVEFTAKPLAILSAFQRDSLPGMIYVEARSSKQVSEA
CNGLVGVYLTRIHLVPIEEMASLLQIKKQEQTVTPGSWVRIRRGKYAGDLAQVMDITDTG
EDVGLKFIPRIDLNPRDDAALDGKKRKKMTGSGANMRPPQRLFNYEEVAKVYGRKSVTRR
SDVYVFQNDTYRDGFIEKDFKVSALILEDVNPTLDEITQFTRRQDGEGENPVDLSIIAEA
SRKAAVLVLQPGDHVEVFEGEQAGIHGVVEEINQDVVTISAIGFDVEGQKIEIPARSVRK
RFKPGDHVKVMTGQNADETGLVVSIADNIVTFLSDMSMQEVSVFSKDLREAAEVGSGTNI
VGNYELHDLVQLDAQTVGVIFKTERDSFRVLDQNGQVRLVQPHQISMRRDSNRAVATDRD
GHEIRINDNMKEVEGEGRKGRVLHIYQSFYAFLHNRDIIENGGVFVTRTRALLSVAPKGS
LVKPGADLSKMNPALVQPTGGMVGSGNMGRGPKDRHIGVTVTVVKGPHKGYAGTIKDTNG
NIARVELRTGNKLIMIDKEKLYRRLPDGKLEPLDRPGGGRGGGFGPGGGGRMGPPYNAGG
FGGNAAGGRTPFGNSGRTPNPYTSTEGRTPGWNASRTPNPYVDGGKTPAWNASSRTPNPY
ADGGKTPAWNASSRTPNPYSSGGGASSWGGATPGGNAAPAGGPSWGGATPGRATTGWGTS
DGWASPRNTSWTATDTTPWSAPTPASAPTPASAPTPTTAATPAFNSGPTPAPMHTPAPPL
AHTPANYWTGQSAPTPFTSFTYGTSPSSSEYTLDEDWMFESIASTYLNRIKVIIRDTKID
NYKDGILENRVGFILSAHRTQGGYEQEVVVAFDDLSGEKETLAAKYVKPIEASRTNEEAL
AMEGPSEVKGRAVLLRANADSAMVEVSPKGDSSVFEVPKTALLALYEQRS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgtcgaagaccttaattcgtacgaccctgatatgcaacaaccccgagaggag
gaggaggaagaagaagaggaagaggaagagtccttcgataagccgcagaaacaaccggcg
cggcgggaatttgaagatgaggaagaggaagaggacgaggaggatgaagaagacgaggaa
gacgaagaagactctggaaggaaacgcaagaaagccaagcaccgtcatcgacgttcggct
gctagtcgtttcctagatattgaagccgaggtcagcgacgatgaagaagacgaagatgaa
gatgaagatataggtgctgatcctttcattgagacgggagaggatatggatgaagatgcg
gcaagaggtcatcatgcttcactggatgcaaggcgacaacttgctgaagaagaacaaagc
ccggaagaaattgcaaaaaatctaagtagacgatatgcccatcgcgccgccgttcgatat
acgggtgacatgaatgaaatcccgcaaagattgctcatgccttcagtgcaagatgcaagt
ttatggcaagttcgagtcaggcctggacgcgagcgcgatattgtgtttagtatcatgcgc
aaagcgctcgatgtcgagtttaccgcaaaacctctcgctatcctttctgctttccaaaga
gactcgcttcccggtatgatatacgtggaagcacgcagctcaaaacaagtttccgaagct
tgtaatggtctcgttggtgtctacctcactcgtatacatcttgtgcccattgaagaaatg
gccagccttttgcaaatcaagaaacaagagcagaccgtgacaccgggtagctgggtgcgc
atccgtcgaggaaaatatgccggagatttggcgcaagttatggatatcaccgatactggc
gaagatgtcggattgaagttcattccccgtattgatctcaatccaagagatgatgctgct
ttggacgggaagaagcggaaaaaaatgactggctcaggcgccaacatgcgtccgccacaa
cgactgtttaattatgaggaggtcgcaaaggtgtatggccgcaagtctgtgactcgtcgg
agcgatgtctacgtatttcaaaacgacacctaccgtgatgggttcatcgaaaaggatttc
aaagtcagcgctttgattctggaagatgtgaatccgactttggatgaaatcacacaattc
actagacggcaggacggggaaggcgagaacccggtagatctttcgattatcgctgaagct
tcacgcaaagctgctgtattggttttacaacctggtgatcatgtagaagtgtttgagggt
gaacaggccggtatccatggtgtggtggaagagatcaaccaggatgtggtgacgatttca
gcgattggatttgacgtggagggtcagaagatcgaaattcctgccaggagtgtgaggaag
aggttcaaacctggtgaccatgtcaaggtcatgactggccagaatgccgatgaaacgggt
ttggtggtttcaattgcggataacatcgtaacgttcttgtcggacatgtcgatgcaagag
gtctctgtgttctctaaggatcttcgtgaagctgccgaagttggctcaggtactaacatt
gttggaaactacgagctgcacgacttggttcaactcgacgcgcaaactgttggtgtcatt
ttcaagactgaacgcgattctttccgtgttctagatcaaaacggtcaggtgcgtttggta
caaccccaccaaatctctatgcgccgggattcaaaccgagcggtggcgacggatcgcgat
ggacacgagatacgcatcaatgacaacatgaaggaagttgagggagagggacgcaagggc
cgtgttctacacatctaccaatccttctacgctttcctccataaccgcgatatcattgaa
aatggcggtgtttttgtgacacggacacgagccttgctctccgtggcaccgaaaggtagt
ctcgtcaaacccggtgcagatctttcgaagatgaacccggcactcgttcaacccactggt
ggcatggtaggctcaggtaatatgggtcggggacccaaagacaggcatattggagtgaca
gtcaccgtagtcaagggacctcataagggatatgcgggtactatcaaggatacgaacggc
aacattgctcgggttgagctacggacggggaacaagcttatcatgatcgacaaagagaag
ctttaccgcaggctgcccgatggcaagcttgaacccctcgatagaccaggaggcggacgt
ggcggtggatttggtcctggtggaggaggtcgtatggggcccccatacaacgctggtggg
tttggtggcaatgctgcaggtggccgtacgcccttcggcaactcgggacgtacaccaaac
ccttatacatccaccgaaggccggacacccggatggaacgcttcaagaacgccaaatcca
tatgttgatggaggaaagacgcctgcgtggaatgcaagttcgcggacgcctaatccttat
gctgatggtggtaaaacaccagcatggaacgccagctctaggacaccaaatccatatagc
agtggaggtggtgcttccagttggggcggtgcgactcctggagggaatgccgcacccgcc
gggggtccgtcatggggtggtgccacgcctggaagagcgaccacagggtggggtacgagt
gacggatgggcgtcaccgaggaatactagttggacagcgactgacacgacgccttggagt
gcacctactccagcttctgcacccacaccagcttctgcaccaacacccacaacagcggct
acgccagcgttcaatagtggacctacaccagcacccatgcatactcctgctcctccgctt
gcccatacacctgctaactattggactggacaatcggctcccacaccattcacaagcttc
acttatggaacaagtcccagctcatccgagtacacgctggatgaagattggatgttcgaa
tctatagcctcgacctatctcaaccgcatcaaggttataatccgggataccaagatcgac
aactacaaagacggtatccttgaaaatcgagtgggttttattctttcagcgcatcggact
caaggcgggtatgaacaagaggttgtggttgcatttgatgacctgtctggagaaaaagag
acattagcggccaagtatgtcaaaccgattgaggcgtcgagaacgaatgaagaggcgttg
gcgatggaaggtcctagtgaggtgaaaggacgtgctgtgttattacgcgccaatgcggat
tctgctatggtggaagtgtcgccgaaaggtgattcgagtgtattcgaggttcctaagacg
gctctgttggctttgtatgagcagagaagttag
DBGET
integrated database retrieval system
