Aromatoleum bremense: pbN1_17100
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Entry
pbN1_17100 CDS
T07149
Symbol
recB
Name
(GenBank) RecBCD enzyme, subunit B
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
abre
Aromatoleum bremense
Pathway
abre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
pbN1_17100 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abre03400
]
pbN1_17100 (recB)
Enzymes [BR:
abre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
pbN1_17100 (recB)
DNA repair and recombination proteins [BR:
abre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
pbN1_17100 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QTQ31701
LinkDB
All DBs
Position
complement(1766991..1770713)
Genome browser
AA seq
1240 aa
AA seq
DB search
MTMHAAALPAAATPRADELDVFECPLDGIRLIEASAGTGKTWNICGLFLRLLVERELPVD
AILVVTFTRAATAELKSRVRERIAGTLAYLDGTAADGDPFVAQLVAALESRAIARAQIRE
RLDLALQTFDEAAIFTIHGYCQRALADTPFAAALPFALELAEDDLELRLEATRDFWRREI
ASDDCPAELGELLIARGDSPERWAALLGRYLARPLAQKRWPENENRGQTTFFGEKRGLSP
IFPAFADACALWNGNGREAHDALLAGLPGLSATSYKADGVALAAKNWTSWLAGGDPLAPL
DVQDGKFALFSVTRLNECVKKHCSAPQHPFFDAAARVLALRDEVIAALDAARLALLRRFL
ETGSARLRETKRERRQIAFDDILFNVHEALAGDDNPWLAAALHRRYPVALIDEFQDTDPL
QFEIFRRIYADGGRHGGLFLVGDPKQAIYSFRNADLHTYLHARGEADTRYTLSRNQRSVG
GLIGACNALFTANPAAFVLDGLAYETVSEGAKPRQRFVDSSAAADPASLRVWWIAPDADG
VLPLRAAVVARAAAATAAEIVRLVGEGAAGRITIGPRALAPGDIAVLVKSHSQGARMREA
LAALGVGSVELSQQSVFHSTDAEELERVLLAIAEPAHLPLLSAALATALMGFDAAALDAL
AADEGALLRVIARFAELREVWLARGLGVMLRRWVVQESVNVRLLARDDGERRLTNLLHLA
ECLHAAGVEHPSPDALLRWFASRRRDAGASEATQVRLESDRNLVQIVTIHRSKGLEYGVV
FCPFLWDGFAGRGDDGEGCVYHDADGGLLLDFRPAARDDDDVKALMRRERDAEFLRLVYV
AMTRAVYRCYLVAGCYLKKNGKTASPTESTRSLLNWLVAGAGTSHAEWLRHKLTTDDIEA
AWARLLERAEPDLAIVNLPAGGGGRLAIAEPAADALQVLPPPARLPSAWRIGSFSALNHG
AGNDAAAQDHDARALLVAPIDGATSIAPAIAPGDDDILFFPRGPAAGDCIHAVFERLDFP
APASRAPAIAAALAEHPQRGAGAPLARMLERLVDDVLATRLPGGIVLGRVARSRTLVELG
FHLPAPRLSAEALNDWLARAGYAVPRLAFGALAGYLKGYIDLVFEHDGRFYVLDWKSNHL
GFTPEDYAPARLEEAMRAHGYHLQHLLYSLALHRHLGRTLPGYDFERHFGGALYLFVRGV
RPGWRLGEHPAGVYVHRPDAATLASLDRLIGGVPAPESVR
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcatgccgccgcgctgccggctgccgcaactccccgcgccgacgagctcgac
gtcttcgaatgcccgctcgacggcatccgcctgatcgaagcgtcggcaggcaccggcaag
acgtggaacatctgcggcctgttcctgcgcctgctcgtcgagcgcgaactgccggtcgac
gcgatcctcgtcgtgacgttcacgcgcgccgcgaccgccgaactgaaaagccgcgtgcgc
gagcgcatcgccggcacgctcgcgtatctcgacggcaccgccgccgacggcgacccgttc
gtggcgcaactcgtcgccgcgctcgagtcgcgggcgatcgcgcgcgcgcagatccgcgag
cggctcgacctggcgctgcagacgttcgacgaagcggcgattttcacgatccacggctac
tgccagcgcgcgctggccgacacgccgttcgccgccgcgctgccgttcgcgctcgaactc
gccgaagacgacctcgagctgcgcctggaggcgacgcgcgacttctggcgccgcgaaatc
gccagcgacgactgtccggccgaactcggcgaactgctgatcgcgcgcggcgacagcccg
gagcgctgggccgcgctgctcgggcgctatctcgcccgcccgctcgcgcaaaaacgctgg
ccggaaaatgaaaataggggacagaccacgtttttcggagaaaaacgtggtctgtcccct
attttcccggcgtttgccgacgcctgcgcgctgtggaacggcaacgggcgcgaggcccat
gacgcgctgcttgccggcctgccgggcctgagcgcgacgagctacaaggccgacggcgtc
gcgctggcagcgaaaaactggacgagctggctcgccggcggcgacccgctcgcgccgctc
gacgtgcaggacggcaagttcgcgctgttctcagtgacgcgcctcaatgaatgcgtgaag
aagcactgcagcgcgccgcagcaccctttcttcgacgccgcggcgcgcgtgctcgcgttg
cgcgacgaggtcattgccgcgctcgacgccgcgcgcctcgcgctgctgcgccgctttctc
gaaacgggctcggcgcgcttgcgcgagacgaaacgcgagcggcgccagatcgcgttcgac
gacatcctgttcaacgtccatgaagcgctcgccggcgacgacaacccgtggctcgccgcg
gcgctgcatcggcgctacccggtcgcgctgatcgacgaattccaggacaccgatccgctg
cagttcgagattttccgccgcatctacgccgacggcggacggcacgggggactcttcctc
gtcggcgacccgaagcaggcgatctacagcttccgcaacgccgacctgcacacatacctg
cacgcccgcggcgaagccgacacgcgctacacgctgagccgcaaccagcgttcggtcggc
ggcctgatcggcgcctgcaacgcgctgttcacggcgaacccggcggctttcgtgctcgac
gggttggcgtacgagacggtcagcgaaggcgcgaaaccgcgccagcggttcgtcgactcg
tcggccgcggccgatccggcgtcgctgcgcgtgtggtggattgcgccggatgctgacggc
gtgctgccgctgcgcgccgcggtcgtcgcccgggcggcggcagcgaccgcggcggagatc
gtccggctcgtcggcgaaggggctgcaggacgcatcacgatcggcccccgcgcgctcgcc
ccgggcgatatcgcggtgctggtcaagagccacagccagggcgcgcggatgcgtgaagcg
ctcgccgcgctcggcgtcggcagcgtcgagctgtcgcagcagagcgttttccacagcacg
gacgccgaggagctcgaacgcgtgctgctcgcgatcgccgagccggcgcacctgccgttg
ctgtcggccgcgctcgcgaccgcgctgatgggcttcgacgccgccgcgctcgacgcgctc
gccgccgacgaaggtgcgctgctgcgcgtgatcgcccgcttcgccgagctgcgcgaagtg
tggctcgcgcgcggcctcggcgtgatgctgcggcgctgggtcgtgcaggagagcgtcaac
gtgcgcctgctcgcgcgcgacgatggcgagcggcggctgacgaatctgctgcatctggcc
gaatgcctgcacgcggcgggcgtcgaacacccgtcgccggacgcgctgctgcgctggttc
gcgagccggcggcgcgacgcgggggcgagcgaggcgacgcaagtgcggctcgaatccgac
cgcaacctcgtgcagatcgtgacgatccatcgttcgaagggcctcgaatacggcgtcgtg
ttctgccctttcctgtgggacggcttcgccggccgcggcgacgacggcgaaggctgcgtc
tatcacgacgcggatggcgggttgctgctcgactttcgccccgccgcgcgcgacgacgac
gacgtcaaggcgctgatgcgccgcgagcgcgacgccgagttcctgcgcctcgtctatgtc
gcgatgacgcgcgcggtgtaccgctgctatctcgtcgccggctgttacctgaagaagaac
ggcaagacggcgtcgccgaccgagagcacgcgcagcctgctgaactggctcgtcgccggc
gccggcacaagccacgcggaatggctccggcacaagctgacgacggacgatatcgaggcc
gcgtgggcacggctgctcgagcgtgccgaacccgatctggcgatcgtcaacctgccggca
ggcggcggtgggcggctggcgatcgccgaaccggccgcggatgcgctgcaggtgctgccg
cccccggcgcgcctgccgtccgcgtggcggatcggcagtttcagcgcactgaaccacggc
gcgggcaatgatgcggcggcgcaggaccatgacgcccgcgccctgctggtggcgccgatc
gacggcgcgacatcgatcgcgccggccatagcgcccggcgacgacgacatcctgttcttc
ccgcgcggccctgcggccggcgactgcatccacgcggtgttcgaacggctcgatttcccc
gctccggcgagccgcgcgccggccatcgcggcggcgctcgccgagcatccgcagcgcggc
gccggcgcgccgctcgcacgcatgctcgagcgcctcgtcgatgacgtgctcgcgacccgg
ctgcccggcggcatcgtgctcggtcgcgtggcccgcagccgcacgctcgtcgaactcggt
ttccacctgccggcgccgcggctgtcggccgaagcgctgaacgactggctcgcgcgcgcg
ggctacgcggtgccgcggctcgcgttcggcgcgctcgcgggctacctgaaaggctacatc
gacctcgtcttcgagcatgacgggcgtttctacgtcctcgactggaaatcgaaccacctc
ggcttcacgcccgaagactatgcgccggcgcgcctcgaagaggcgatgcgcgcgcacggc
taccatctccagcacctgctctacagcctcgcgctgcaccgccatctcgggcgcacgctg
ccgggctacgacttcgagcgccatttcggcggcgcgctgtatcttttcgtgcgcggcgta
cggcccggctggcggctcggcgagcatccggcaggcgtgtatgtccaccgcccggacgcc
gcaaccctcgctagcctcgaccgcctgatcggcggcgtccccgccccggaatccgtgcga
tga
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