Argiope bruennichi (wasp spider): 129981103
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Entry
129981103 CDS
T09870
Name
(RefSeq) THO complex subunit 1-like isoform X1
KO
K12878
THO complex subunit 1
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03013
Nucleocytoplasmic transport
abru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129981103
09122 Translation
03013 Nucleocytoplasmic transport
129981103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abru03019
]
129981103
03041 Spliceosome [BR:
abru03041
]
129981103
Messenger RNA biogenesis [BR:
abru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129981103
Spliceosome [BR:
abru03041
]
Complex C
Other components
EJC/TREX
129981103
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129981103
BRITE hierarchy
Motif
Pfam:
efThoc1
Death
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
129981103
NCBI-ProteinID:
XP_055947751
LinkDB
All DBs
Position
8:58700331..58717500
Genome browser
AA seq
637 aa
AA seq
DB search
MPNYRAMKAEFFTKFKDSVKKDNLYEFLKASKAILSTWKESDFKNLIELTIREVLLDFIK
SGADIVLLERVFQFSIDAALQDAAAGNIPVLVIGDMFESSTIIECETYFSFVESRVDIFK
KDIFFKVCKNHLLRSCNDLLKRLSRSQNTVFCGRILMFLAHIFPLSERSGLNIISEFNLE
NTTAYNTNDDMFNDIASEKGDAAEEGEISSQNQSSFVVDKNLYQKFWSLQDYFRSPNTCY
NKMQWRQFTNCTSDVLTVFGSFKSDDANSSKWKQAKLPSPNGSCVYFAKYLTSPKLLELE
LSDSHFRRYVLVQFLILFQYLSLPVKFKLESYVLTEEQQNWVKETSKKIYKLLEETPPNG
EAFSRDVQQILQREEYWNAWKNEGCPDFKPLSDRAEVEKKLTKRPIEDIHTYPNKKASAE
VTKIWNTKPNNWEACRSAKRNFVPSLETYFGITPKTEGGQVIQKRDTTDSKYTWKALRLL
CMKSPYIFTANSTPAKSVSEYLDTIIQKVAKEKPQIQQDNMTVETAVAEDETMEDTNEDF
FPNSEEDSKDEVKKENVLTKALIQTISSKLQDNWKTLAVKLGFQDDEIEYYETFPDTKAQ
TEQMLTVWMERDGNLAAFTKILQSAGLLSGVLSLITS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgccaaattatcgtgctatgaaagcggaattttttacaaaattcaaggattccgttaaa
aaagataatctctatgagtttcttaaggcttcgaaagcaattttatcaacatggaaagaa
agtgatttcaaaaatctgattgagctgacgattcgagaagttctgttagatttcattaaa
agtggagctgatattgtacttttggaaagagttttccaattttcaattgatgcagcttta
caagatgctgctgctggtaatataccagttcttgtcattggagatatgtttgaatcctct
actattattgaatgtgaaacatatttttcttttgttgaaagcagagtagatatattcaaa
aaggatatattctttaaagtatgtaagaatcatctattgaggtcttgtaatgatttactg
aaaaggttgtctagatcacaaaatactgtgttttgtggccgaattcttatgttcttagct
catatatttcctttatcagaacgatctggtttgaacattataagtgaatttaacttggaa
aataccactgcatacaacactaatgatgatatgttcaatgatattgcttctgaaaaaggt
gatgcagcagaagaaggagaaatttcatcacaaaatcagagctcttttgtagttgataag
aatttgtaccagaagttttggtcgctgcaagattatttccgcagtccaaatacttgctat
aataaaatgcagtggagacaattcactaattgtacatctgatgtcttaactgtatttggg
agcttcaaatcggatgatgcaaattcatcaaaatggaagcaggcaaaattgccatcgcca
aatggatcttgtgtttattttgctaaatatttgacaagccctaagttattggaactggaa
ttgagtgatagccattttcgtcgctatgttttagtacagttcttgattctttttcagtac
ttatcacttccagtgaaatttaaactagaatcatatgtattgacagaagaacagcaaaac
tgggttaaagaaacttctaagaaaatatataaattattggaagaaactcctccaaatgga
gaagcattttctcgtgatgtccaacaaattcttcaaagagaagaatactggaatgcatgg
aagaacgaaggatgccctgatttcaaacccttgtctgatagagctgaagttgaaaaaaaa
ttgacaaaacgacccattgaagatattcatacatatcccaataaaaaagcaagtgctgaa
gtaacaaaaatttggaacacgaaaccaaataactgggaagcttgcagatctgctaaaagg
aatttcgttccctctttggaaacttattttggaataactcctaaaactgaaggtggacaa
gtaattcagaaaagagatacaactgatagtaaatatacatggaaagctttacgactgttg
tgtatgaagtcaccatatatttttactgccaattcaactccagctaaaagtgtatccgaa
tacttggacactattatacaaaaagtagcaaaagagaaacctcaaattcaacaagataat
atgactgtggagacagctgtggctgaagatgaaacaatggaagatacgaatgaagatttt
tttcctaactcagaagaagattccaaagatgaagtaaaaaaagagaatgttttgacaaaa
gctttgatccaaactatatctagtaaattacaagataactggaaaactcttgctgtaaaa
ttaggattccaggatgatgaaatcgaatattatgaaacatttcctgatacaaaagcacag
actgagcaaatgctgactgtttggatggaaagagatggaaatttagccgcatttacaaaa
atcctgcaaagtgcaggattattaagtggtgtattgtcattaattacctcataa
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