Azospirillum baldaniorum Sp245: AZOBR_p1110045
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Entry
AZOBR_p1110045 CDS
T02152
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma factor (sigma54)
KO
K03092
RNA polymerase sigma-54 factor
Organism
abs
Azospirillum baldaniorum Sp245
Pathway
abs02020
Two-component system
abs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AZOBR_p1110045 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AZOBR_p1110045 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abs03021
]
AZOBR_p1110045 (rpoN)
Transcription machinery [BR:
abs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AZOBR_p1110045 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
CCD00581
UniProt:
A0A9P1JVG4
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All DBs
Position
AZOBR_p1:1003949..1005526
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AA seq
525 aa
AA seq
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MALSQRLDLRQTQSLVMTPQLQQAIKLLQLSNIELSDFVDREIEQNPLLERDGGPGEGGG
EPGGDGAGDGGGEPGAVDLAAPEERQPPMTDGRTRDTVEMTSSETMGSASDAPLDTDFEN
VYSDDRFSDGTDGSSDVYGSWQERGGRGGFEDDESNLEATLTGQKSLRDHLTEQLKIDLP
DLGDQLIGLALIDMLDEAGWITGLEVESLAGQLGCAPERVERVLAACQRFDPPGIFARSL
KECLAIQLREKNRFDPAMEALLDHLELLAARNLPALMKVCGVDAEDVADMVAEIRKLNPK
PALSFDHTPAQLVTPDILMRANPGGGWLIDLNPDTLPRVLVNHRYFARISGTARNKADKE
YITERFQSANWLVKSLHQRATTILKVASEIIRQQDAFFIHGVSHLKPLILRDIAEAIGMH
ESTVSRVTTNKFMATPRGVFELKYFFTSAIQGADGQAAHSAEAVRYRIKAMIDAEKPDDV
LSDDKIVEILRGEGIDIARRTVAKYREAMRIPSSVQRRRAKMSRM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagccaacgccttgatcttcgtcagacccagtccctggtgatgactccgcag
ctgcagcaggccatcaagctgctgcagctgtcgaacatcgaactgtcggacttcgtggac
cgcgagatcgagcagaatcccctgctggagcgcgatggtggccccggcgagggcggcggc
gagcccgggggagacggtgccggtgacggcgggggcgagcccggagcggtggacctcgcc
gcgccggaggagcgccagccgccgatgaccgacgggcgcacccgcgacacggtggagatg
acgtcgtcggagacgatggggtcggcctccgacgcgccgctcgacaccgatttcgagaat
gtctattccgacgaccgtttctccgacgggacggacggctccagcgacgtctacggctcc
tggcaggagcgcggcggccgcggtggcttcgaggacgacgagtccaacctggaagccacg
ctgaccggccagaagagcctgcgcgaccatctgaccgagcagctgaagatcgacctgccg
gacctcggcgaccagctcatcggtctggcgctgatcgacatgctggacgaggccggctgg
atcaccgggctggaggtggagagcctcgcggggcagctcggctgcgcgccggaacgggtg
gagcgggtgctcgccgcctgccagcgcttcgacccgccgggcatcttcgcgcggtcgctg
aaggaatgcctggcgatccaactgcgcgagaagaaccgcttcgacccggcgatggaggcc
ctgctcgaccatctggagctgctggcggcgcgcaacctgccggcgctgatgaaggtctgc
ggcgtggacgccgaggacgtcgccgacatggtggcggagatccgcaagctgaaccccaag
ccggcgctcagcttcgaccacacgcccgcccagctcgtcacccccgacatcctgatgcgc
gccaaccccggcggcggctggctgatcgacctgaacccggacactttgccgcgggtgctg
gtcaaccaccgctatttcgcgcgcatttccggcaccgcccgcaacaaggcggacaaggaa
tacatcaccgagcgtttccagtcggccaactggctggtcaagtcgctgcaccagcgcgcc
accacgattttgaaggtggccagcgagatcatccggcagcaggacgcctttttcatccac
ggcgtctcgcatctgaagccgctgatcctgcgcgacatcgccgaggcgatcggcatgcac
gagagcacggtcagccgcgtcacaaccaacaagttcatggcgacgccacgcggcgtgttc
gagttgaaatatttcttcacctccgccatccagggggctgacgggcaggcggcccactcg
gcggaggccgtgcgctaccgcatcaaggcgatgatcgacgccgagaagccggacgacgtg
ctgtcggacgataaaatcgtcgaaatccttcgtggtgaagggatcgacattgcgcgccgg
acggtcgcgaagtatcgtgaagcgatgcgcattccgtcatcggtgcagcgacgccgtgcc
aagatgtcacgcatgtaa
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