Azospirillum baldaniorum Sp245: AZOBR_p60004
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Entry
AZOBR_p60004 CDS
T02152
Symbol
rfbC
Name
(GenBank) dTDP-4,deoxyrhamnose 3,5 epimerase (fragment)
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
abs
Azospirillum baldaniorum Sp245
Pathway
abs00521
Streptomycin biosynthesis
abs00523
Polyketide sugar unit biosynthesis
abs00541
O-Antigen nucleotide sugar biosynthesis
abs01100
Metabolic pathways
abs01110
Biosynthesis of secondary metabolites
abs01250
Biosynthesis of nucleotide sugars
Module
abs_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
abs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
AZOBR_p60004 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AZOBR_p60004 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AZOBR_p60004 (rfbC)
Enzymes [BR:
abs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
AZOBR_p60004 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CCD03940
UniProt:
A0A9P1K1N5
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Position
AZOBR_p6:6898..7329
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AA seq
143 aa
AA seq
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MERDWVQDNQSLSAMPGTVRGLHYQLEPQAQTKLVRVLRGRILDVALDIRRGSPTFGRHV
AVELSADGLEQLLVPVGFAHGFCTLEPDTIVAYKVDAFYSHECERAILWNDPALGIAWPS
VAGSVVSDKDMVASPLAAAIDLL
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
ttggagcgggactgggttcaggacaaccagtccctgtcggccatgccgggcacggtgcgc
ggcctgcattaccagttggagccgcaggcccagaccaagctggtccgcgtcctgcgcggc
cgcatcctcgacgtcgcgctggacatccgccgcggctccccgaccttcgggcggcatgtg
gcggtggagctgagcgccgacgggctggagcagctgctggttccggtggggttcgcccac
ggtttctgcacgctggaacccgacacgatcgtcgcctacaaggtcgacgccttttattct
cacgagtgcgagcgggcgatcctgtggaacgatcccgcgcttggcatcgcctggccgtcc
gtggccgggtccgtggtctcggacaaggacatggtggcgtcgcccctggccgcggccatc
gacctgctttga
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