Agaricus bisporus var. bisporus H97: AGABI2DRAFT152253
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Entry
AGABI2DRAFT152253 CDS
T03140
Symbol
AGABI2DRAFT_152253
Name
(RefSeq) hypothetical protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
03036 Chromosome and associated proteins [BR:
abv03036
]
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
Coactivators
SAGA/TFTC/STAGA complex
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
Chromosome and associated proteins [BR:
abv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
STAGA complex
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
TFTC complex
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
SAGA complex
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
SLIK complex
AGABI2DRAFT152253 (AGABI2DRAFT_152253)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Bromo_TP
CBFD_NFYB_HMF
NUP
CENP-S
TFIID-31kDa
Diacid_rec
CcdA
Motif
Other DBs
NCBI-GeneID:
18079360
NCBI-ProteinID:
XP_006462847
JGI:
Agabi_varbisH97_2_152253
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSKPKNRPPQTVQSGIYKSDAIRDVAESLGINISDTVASVLASDVEYRIHQVVEEASRFM
RHGRRTTLTSSDIDLALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSNQPSAAGPVY
FVEDEEIDFERVMREEKVMLPKGVSWTAHWLAVEGVQPLIPENPPAVPREEPTAAGETKV
NGALTSVPAATGAAGLLPGGGQKHGALPNASSAQSANLVKQVLSRELQLYYTRLTSSLLP
PSNTLDYTTKKAAALASLRHDAGLQALLPYLVRWVGEGVAGVLKTGKQDDGDGKVLEVLM
DVVSALLENKTLFVEPYLHQLLPPILSTLLHSSLPAALSTQLRVCASQTLSHVLTQHSTT
YPSLSPRIMKTLLLALISPGKSRGTREGAVRGLMGVGKEAVRKGLVDAGGARVIANEYTG
TSAEEQALLEAVTVMSTTYYLHRRTNAWFQEALQVLRPMTEMSDSLDSSNEEDAAIARRL
QEAIGDQFAGRVAVDRVWAREVLGISE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccaaaaaccgaccaccacaaacagtccagtcaggaatctacaagtcagat
gctatcagggatgtcgcagagtccttaggaattaatatttctgacacagtcgcgtcggta
ctcgccagtgatgtcgaatatcggatacatcaagtagtagaggaagcgtcccgattcatg
cgccacggccgacgaacaacactcacatcaagcgatatcgaccttgccttacgaactctg
aacatcgaaccactatatggccacctcccattctctcaaccctcttaccgtaaagccctc
ccgttcccccaaatgaaccagcctggctcaaatcagcctagtgcagctggacccgtgtat
ttcgtcgaggacgaagaaattgatttcgaacgtgtcatgagggaggaaaaagtcatgttg
ccaaagggcgtcagctggaccgctcattggttagcagtggagggggttcagcctttgatt
ccggagaatccgcctgctgttccgcgggaagagcctacggccgcaggtgaaaccaaggtc
aatggcgctttgacctctgttcctgcggccactggtgctgctggtctacttccaggagga
ggtcagaaacacggagctctgccaaacgccagcagtgcacaatctgcaaatctggtcaaa
caggtcctctcgcgcgagttacaactctattacacgcgtctcacatcttctcttttaccc
ccatccaatacgctggactatacgaccaaaaaagcagctgctctcgcaagtctacggcat
gatgcagggttgcaggcgttgttaccgtatctcgtgcggtgggttggagaaggcgttgcc
ggcgttcttaaaactggaaaacaagatgatggagacggaaaagtcttggaagtccttatg
gacgttgtgagtgctctgttggagaacaaaacattattcgttgaaccataccttcatcaa
ctactgccaccaatcctttcgaccctccttcattcctcacttcccgcagcactttcaaca
caactccgtgtctgcgcttcccaaactctttctcatgttctcacgcagcacagtacgaca
tacccgtctctatctcctcgtatcatgaaaacacttttgttggcgctaatcagtccaggt
aaaagtcgcggaacgagagaaggtgctgtacgtggactgatgggagtcggcaaagaagct
gtgagaaaaggtctggtcgatgctggcggtgcacgcgtgatagcgaacgaatatacggga
actagcgcagaagaacaggcgttgttagaagctgtcacggtaatgtccacaacttattac
ctacatcgacgaactaacgcgtggtttcaggaagctttgcaagtgctacgacccatgacg
gagatgtcagattctctcgattcaagcaatgaggaagatgcagcgattgcacggagattg
caagaagcaattggtgaccaatttgctggacgtgtcgctgttgatcgggtgtgggcaagg
gaggttctgggtatatccgaatga
DBGET
integrated database retrieval system
