Agaricus bisporus var. bisporus H97: AGABI2DRAFT187731
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Entry
AGABI2DRAFT187731 CDS
T03140
Symbol
AGABI2DRAFT_187731
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03013
Nucleocytoplasmic transport
abv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AGABI2DRAFT187731 (AGABI2DRAFT_187731)
03015 mRNA surveillance pathway
AGABI2DRAFT187731 (AGABI2DRAFT_187731)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT187731 (AGABI2DRAFT_187731)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AGABI2DRAFT187731 (AGABI2DRAFT_187731)
mRNA cycle factors
P-body specific factors
AGABI2DRAFT187731 (AGABI2DRAFT_187731)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
18080834
NCBI-ProteinID:
XP_006455323
JGI:
Agabi_varbisH97_2_187731
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MSTAIPSSPAKSKSKKVKEKEKDRDHERKQLPGERLKIVVRRLPPNLPEDIFWQSVSNWV
TDDTVMWKLYFPGKPKKRMNKENIPSRAYIAFKDSEHLLFFSREYDGHKFVDKAGNESYA
VVEFAPYQKVPGEKKKPDSRNATIEKGQALRVRYAMFSISNAHLDEDYISFVESLNVQSN
AEPVTIETLVASTRPASPPKTTPLLEALKAERQAQKDKEAIIRNHPHYKDLMNAPNPHAL
RKEEKRKIARAEVPPPSVGKKPKKGAPSPAPSKQIQIQTKPNASGSLTGKPNLVPPTKPS
GRPGRVRHASKGPTEATPVPPTAPVPSTSPKDTTPVANSPHQIPPSVPTSTAPPRRGRPV
LGLGSRHFEAALNGVGVNGERKRKEKGKEPATATAFAQEPNAQDKPVPAPVSPRRSRHRK
EGPSGNAASPSVIPDANGSSTLTMQQGEGPSVPNIFNVGRGGRRGGRGGRGRGGPPRGG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcaatcccatcttcacccgcaaaatccaagtcaaagaaagtaaaggaaaag
gaaaaggaccgggaccatgaacgcaagcagttgccaggcgagcgcctcaaaatcgtcgtt
cgtcgcttaccgcccaatcttcctgaggacatcttctggcaaagcgtatccaactgggtt
acagatgacactgtcatgtggaagttgtacttcccaggaaaaccgaagaaacggatgaac
aaggagaatatcccatctcgtgcctatatcgccttcaaggattcagaacatctgctgttt
ttcagccgtgaatacgatggtcacaagtttgttgataaagccgggaatgagtcgtatgcc
gttgtcgagttcgcaccataccaaaaagttccgggagagaagaagaaacccgactctcgc
aatgcgacaattgaaaaaggtcaagccctgcgtgttcgatatgcaatgttctctatctct
aacgcccacctagacgaagattatatttccttcgttgagtcattgaacgtacagtcgaat
gcggaaccagtcacaatcgagaccctggtcgcgtccactcgtcctgcctccccaccgaag
acaacgcctcttcttgaggctcttaaggccgagagacaggctcagaaagacaaggaggct
attatcaggaatcaccctcattacaaggacctcatgaatgctccgaacccacacgctctt
cggaaggaagagaagagaaagatcgctcgagccgaagttcctccaccatcggtcggcaag
aaaccgaagaaaggagcgccatcgccagcgccttcaaaacagattcaaattcaaaccaaa
cccaacgctagcggaagtttgactggcaaacctaacttggtgccacccactaagccgtca
ggtcggcctggtcgcgtccggcatgcttcgaaggggcctactgaggctactccggtgcca
cccactgcccctgttccctcaacgtcacccaaggatacaaccccagtggctaactctcct
caccaaataccaccttctgtgcctacttccacggcacctccacgacgcggaagaccggtt
ctgggcctaggttctagacatttcgaggccgctctgaacggtgtcggtgtcaacggtgaa
cgaaagcgaaaagaaaaggggaaagagcccgccactgctactgcatttgcacaagagccc
aatgctcaagataaaccagtaccagcacccgtgtctccaaggaggtcacgtcatcggaag
gaaggtccatccgggaacgctgcctctccttctgtcattccggatgccaatggttcaagc
acactcacaatgcaacaaggggaaggtcccagtgttccaaacatattcaatgtcggtcgt
ggtggtagacgtggaggtagaggcggtagaggaagaggcggtccccctaggggcgggtaa
DBGET
integrated database retrieval system