KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT187731
Entry
AGABI2DRAFT187731 CDS       T03140                                 
Symbol
AGABI2DRAFT_187731
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03013  Nucleocytoplasmic transport
abv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AGABI2DRAFT187731 (AGABI2DRAFT_187731)
   03015 mRNA surveillance pathway
    AGABI2DRAFT187731 (AGABI2DRAFT_187731)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abv03019]
    AGABI2DRAFT187731 (AGABI2DRAFT_187731)
Messenger RNA biogenesis [BR:abv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     AGABI2DRAFT187731 (AGABI2DRAFT_187731)
   mRNA cycle factors
    P-body specific factors
     AGABI2DRAFT187731 (AGABI2DRAFT_187731)
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 18080834
NCBI-ProteinID: XP_006455323
JGI: Agabi_varbisH97_2_187731
LinkDB
Position
Unknown
AA seq 479 aa
MSTAIPSSPAKSKSKKVKEKEKDRDHERKQLPGERLKIVVRRLPPNLPEDIFWQSVSNWV
TDDTVMWKLYFPGKPKKRMNKENIPSRAYIAFKDSEHLLFFSREYDGHKFVDKAGNESYA
VVEFAPYQKVPGEKKKPDSRNATIEKGQALRVRYAMFSISNAHLDEDYISFVESLNVQSN
AEPVTIETLVASTRPASPPKTTPLLEALKAERQAQKDKEAIIRNHPHYKDLMNAPNPHAL
RKEEKRKIARAEVPPPSVGKKPKKGAPSPAPSKQIQIQTKPNASGSLTGKPNLVPPTKPS
GRPGRVRHASKGPTEATPVPPTAPVPSTSPKDTTPVANSPHQIPPSVPTSTAPPRRGRPV
LGLGSRHFEAALNGVGVNGERKRKEKGKEPATATAFAQEPNAQDKPVPAPVSPRRSRHRK
EGPSGNAASPSVIPDANGSSTLTMQQGEGPSVPNIFNVGRGGRRGGRGGRGRGGPPRGG
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgtccaccgcaatcccatcttcacccgcaaaatccaagtcaaagaaagtaaaggaaaag
gaaaaggaccgggaccatgaacgcaagcagttgccaggcgagcgcctcaaaatcgtcgtt
cgtcgcttaccgcccaatcttcctgaggacatcttctggcaaagcgtatccaactgggtt
acagatgacactgtcatgtggaagttgtacttcccaggaaaaccgaagaaacggatgaac
aaggagaatatcccatctcgtgcctatatcgccttcaaggattcagaacatctgctgttt
ttcagccgtgaatacgatggtcacaagtttgttgataaagccgggaatgagtcgtatgcc
gttgtcgagttcgcaccataccaaaaagttccgggagagaagaagaaacccgactctcgc
aatgcgacaattgaaaaaggtcaagccctgcgtgttcgatatgcaatgttctctatctct
aacgcccacctagacgaagattatatttccttcgttgagtcattgaacgtacagtcgaat
gcggaaccagtcacaatcgagaccctggtcgcgtccactcgtcctgcctccccaccgaag
acaacgcctcttcttgaggctcttaaggccgagagacaggctcagaaagacaaggaggct
attatcaggaatcaccctcattacaaggacctcatgaatgctccgaacccacacgctctt
cggaaggaagagaagagaaagatcgctcgagccgaagttcctccaccatcggtcggcaag
aaaccgaagaaaggagcgccatcgccagcgccttcaaaacagattcaaattcaaaccaaa
cccaacgctagcggaagtttgactggcaaacctaacttggtgccacccactaagccgtca
ggtcggcctggtcgcgtccggcatgcttcgaaggggcctactgaggctactccggtgcca
cccactgcccctgttccctcaacgtcacccaaggatacaaccccagtggctaactctcct
caccaaataccaccttctgtgcctacttccacggcacctccacgacgcggaagaccggtt
ctgggcctaggttctagacatttcgaggccgctctgaacggtgtcggtgtcaacggtgaa
cgaaagcgaaaagaaaaggggaaagagcccgccactgctactgcatttgcacaagagccc
aatgctcaagataaaccagtaccagcacccgtgtctccaaggaggtcacgtcatcggaag
gaaggtccatccgggaacgctgcctctccttctgtcattccggatgccaatggttcaagc
acactcacaatgcaacaaggggaaggtcccagtgttccaaacatattcaatgtcggtcgt
ggtggtagacgtggaggtagaggcggtagaggaagaggcggtccccctaggggcgggtaa

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