Agaricus bisporus var. bisporus H97: AGABI2DRAFT189464
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Entry
AGABI2DRAFT189464 CDS
T03140
Symbol
AGABI2DRAFT_189464
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI2DRAFT189464 (AGABI2DRAFT_189464)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abv03041
]
AGABI2DRAFT189464 (AGABI2DRAFT_189464)
Enzymes [BR:
abv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGABI2DRAFT189464 (AGABI2DRAFT_189464)
Spliceosome [BR:
abv03041
]
Complex C
Other components
Step II factors
AGABI2DRAFT189464 (AGABI2DRAFT_189464)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
nSTAND3
T2SSE
AAA_30
AAA_19
PhoH
Motif
Other DBs
NCBI-GeneID:
18081139
NCBI-ProteinID:
XP_006454167
JGI:
Agabi_varbisH97_2_189464
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MRGRSYDNHRERADGARSLDERPVLYKIYSGKVVGLKDFGAFVALDGVAGRAEGLVHVSS
IQAGARANSANDLLSRNQPVKVKVLGVAGTRISLSMKDVDQLTGRDLTPYLRIRSEAELE
EERARTVHVSSGANNVSLRSKDEAPVRSAKRLTSPERWELKQLISSGQLDASEYPDLNEE
VNNPMAHAEVEEELDIEIREDEPPFLAGQTKRSLELSPVKIVKAPDGSLNRAALNGASLA
KERREMRQQEANEEADSQARDFSQPWLDPMSKDSDKMFAQDLRGSLKSQKVGEVPKWKEQ
SFNKATTFGEITNLSIQDQRKSLPIYKLRNQLLQAIGDHQVLIVVGDTGSGKTTQMVQYM
AEEGYADKGRIGCTQPRRVAAMSVAKRVSEEVGCRLGQEVGYTIRFEDCTSPETRIKYMT
DGMLQRECLIDPLCSSYSVIMLDEAHERTIATDVLFGLLKKAVKRRPDLKLIVTSATLDA
EKFSKYFYGCPIFTIPGRAYPVEMLYTKDPENDYLDASLITVMQIHLSEPPGDVLLFLTG
QEEIDTACEILFERMKALGPKVPELIILPIYSALPSEVQSRVFEPTPPGARKVVIATNVA
ETSLTIPGIYYVVDPGFSKQNAYDPRLGMDSLVVMPISQAQARQRAGRAGRTGPGKCYRL
YTEAAYRNEMLPNSIPDIQRTNLSSTILQLKAMGINDLLSFDFMDPPPSQTMLTALENLY
ALSALDDEGLLTRLGRKMADFPMEPPLAKMVIASVDLGCSEDILSIVAMLSVQTVFYRPK
EKQSQADSKKAKFHQPEGDHLTLLTVYNGWKAANFSNPWCYENFIQARSMRRAQDVRKQL
LGIMDRYKHDVVSAGRDYNRVRQAICSGFFRHAAKKDPSEGYKTLAEGTPVYIHPSSALF
NRNPEWLVYHELILTTREYCHNVTVIEPKWLVEFAPQCFKVADANKISKRKKQETIEPLF
NKYEKPDEWRLSKVRRSARSSQTFG
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggtagaagctatgacaaccatcgtgaacgtgccgatggtgctcgttctctggac
gaacggccagttttgtacaagatttatagtgggaaagtagttggcttgaaggatttcggg
gcctttgttgcactagatggtgttgccgggcgagccgagggtttggttcacgtttcaagt
atccaggctggcgccagagctaattctgccaatgatctactcagccgtaatcaacccgtc
aaagtcaaagtattgggcgtggccggtaccagaatcagcctctccatgaaggacgtcgat
cagttgacggggcgcgatctcacgccttaccttcgcatccggtcagaggcagagcttgaa
gaagagcgagctcgtacggtccatgtgtcatcaggggcgaacaatgtttctttgcggtca
aaggatgaagcccctgtcaggtccgccaagcggctcacatctcctgaacgttgggagctc
aaacaactcatatcgtccggtcaactcgatgcgtcagagtaccctgaccttaacgaggaa
gttaataaccctatggcacatgctgaagtagaggaggaattagatatcgaaatccgggag
gatgagcctcccttcctggcgggacaaactaagcgcagtcttgaacttagtccagtgaag
attgtcaaagcaccggatggctcgctcaacagagctgcactcaatggtgcgtctttggca
aaggagcgccgtgaaatgcgacaacaggaagcgaatgaagaggctgattctcaggcacga
gacttcagccagccttggctagatcctatgtccaaggattcggacaaaatgtttgcgcag
gatcttcgcggaagcttaaagagccaaaaggtgggggaagtgccaaaatggaaagagcaa
agttttaataaggcaacaacctttggcgaaatcacaaatctcagtatacaagatcaacga
aaaagcttacccatttataagcttcgcaatcagctattacaagctattggagatcatcaa
gttttgatcgtcgttggtgatacaggttcaggaaaaacaactcagatggttcaatacatg
gccgaagaaggttatgctgacaagggaaggatcgggtgcacgcagccgcgtcgtgtcgcc
gcaatgtctgttgcgaaacgtgtttcagaggaagtgggttgtcgtcttggacaagaagtt
ggctataccatccgttttgaggattgtaccagcccagaaactcgtatcaagtacatgacc
gacggtatgctacagcgtgaatgtttgatcgacccgctctgtagcagttactcggtcatt
atgttggatgaagctcacgaacggacgattgctactgatgtgctatttggactgcttaaa
aaggccgttaaacgtcgccccgatctcaagctcattgtaacatcggcaactctcgatgct
gagaagttttccaagtatttctacggctgcccaatcttcactattcctggacgagcttat
ccggtcgaaatgctatacactaaggatccggaaaatgactatcttgatgcgtccttgatc
accgtcatgcagattcacctttctgaaccccctggtgacgtactattattccttaccggc
caagaagaaatcgacacagcttgcgagattctattcgagcggatgaaggctctaggtccc
aaagtccctgaacttatcatcctacctatctattcggccttaccttcggaagtgcagtcg
cgggtcttcgagcccactccgcctggtgctcgtaaggtcgtcatcgcgaccaacgtcgct
gagacaagtttgaccatcccaggtatctattatgtcgtggacccaggcttctcgaagcag
aatgcttatgacccccgcttgggtatggactcgcttgttgtcatgcctatctctcaagcg
caagcccgccagcgggctggtcgcgccggtcgcacaggacctggaaaatgctatcgtctc
tatacggaagccgcctacaggaatgagatgctccccaactccatccctgacatccagcgc
actaacctttcatcaaccatcctacaactcaaagcaatgggtatcaacgacctgttgagc
ttcgattttatggatccacctccctcccagacgatgttaacagctttagagaatctgtat
gctttgtctgcgctggatgatgaaggtctgctgacgcgtcttggccgtaaaatggcggat
ttccccatggaaccgcctcttgcaaaaatggtcatagcatcagttgatctgggttgctcg
gaggacatcttatctatcgtcgcaatgctgtcagtccagaccgtgttttaccgtcccaaa
gagaagcagtcacaggctgattccaagaaggcgaaattccatcaacccgagggggatcac
cttacgcttttgacagtctacaatggttggaaagccgccaacttctcgaatccttggtgt
tatgagaattttattcaagcaagaagtatgcgacgggcacaggatgttaggaaacagtta
cttggaatcatggatagatacaaacatgatgttgtttccgctgggcgagattataaccgt
gttcgccaagctatttgctcaggtttcttccggcatgccgccaaaaaagatccctcagaa
ggctacaaaacacttgctgagggaacaccagtgtacattcacccatcctccgcattattc
aacaggaatccggagtggttggtgtatcacgaactaatcttaaccacgcgcgagtattgt
cacaatgtgacggtgattgaaccgaagtggctggtagaatttgctccgcagtgtttcaaa
gttgcagatgccaacaagatcagcaagcgaaagaaacaagagacgatagagcccttgttc
aacaagtatgagaagccggacgaatggcggttgtcgaaagtcaggaggagtgcaagatcg
tctcaaacgttcggatga
DBGET
integrated database retrieval system
