Agaricus bisporus var. bisporus H97: AGABI2DRAFT204710
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Entry
AGABI2DRAFT204710 CDS
T03140
Symbol
AGABI2DRAFT_204710
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03022
Basal transcription factors
abv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGABI2DRAFT204710 (AGABI2DRAFT_204710)
09124 Replication and repair
03420 Nucleotide excision repair
AGABI2DRAFT204710 (AGABI2DRAFT_204710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abv03021
]
AGABI2DRAFT204710 (AGABI2DRAFT_204710)
03400 DNA repair and recombination proteins [BR:
abv03400
]
AGABI2DRAFT204710 (AGABI2DRAFT_204710)
Transcription machinery [BR:
abv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AGABI2DRAFT204710 (AGABI2DRAFT_204710)
DNA repair and recombination proteins [BR:
abv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AGABI2DRAFT204710 (AGABI2DRAFT_204710)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
zf-HIT
Motif
Other DBs
NCBI-GeneID:
18084113
NCBI-ProteinID:
XP_006461155
JGI:
Agabi_varbisH97_2_204710
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MPPRRELVIGAADSDSDISLPDDDYDASRDKGKSKGKGRAEKKKVDKGKGKAKDSQAYTW
EASYTRSWETVQEDEAGSLQTSVQELMARGRRKRLLAPAAAIRRTIIRHVILLLDLSSAM
LDRDMRPTRFDLMLQYAREFILEWFDQNPLGQIGVVGMRAGLGERIGDLSGESGNPQEVL
SYIKERHKLEPTGEPSLQNAIEMAKASMSHLPTHSSREIIIIFGSLTTCDPGNIHETLET
CVKNKVRISVVALAAEMKICRELSDKTGGQFGVAMNEGHFKDLLFELVPPPAQRALTRTM
GAPSASLSADLMMMGFPTRLPEASAPTLCVCHAELKSQGFLCPRCLAKVCDVPTDCHVCG
LMIVSSPHLARSYHHLFPVKPYDAVPNLEDIPQPSDACHGCAKLFPTTTSIPIGEGVSVV
GRYRCPDCRHDFCSDCDVFVHEVIHCCPGCGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaggcgagagttggttatcggcgcggccgactcggactcggacatctctctt
ccagatgacgactacgacgccagccgggataagggcaaaagcaagggtaaaggtagggcg
gaaaagaaaaaagttgacaaaggaaagggaaaagccaaagactctcaagcatatacttgg
gaagcttcatatacgcgttcatgggagactgtgcaagaggacgaagctgggagtctccag
acgtccgtccaggaactcatggcaaggggccgtcggaaaagacttcttgctccagctgcg
gccattcgtcgaactataattcgtcatgttattctgttactggatctttcctctgctatg
ctggaccgtgatatgcgtccgacacgatttgacttgatgcttcaatatgctcgtgaattt
atcttagaatggttcgaccagaatccgctagggcaaattggtgttgttggaatgcgagca
ggccttggagagcgtatcggggatctttcaggcgaatcaggtaatcctcaagaggtcttg
tcctacatcaaagaacgacataagctcgagcctactggagaacccagtttacagaatgcc
atcgaaatggcaaaagcaagcatgagtcatcttccaacccattcctcgcgcgaaataata
atcatattcggttccttaaccacatgcgatcccggcaatattcacgaaacgctcgaaaca
tgtgtcaagaacaaagttcgcatctctgtagtcgcgctcgctgcagagatgaagatatgt
cgcgaactatctgataaaacaggcggccaattcggtgtagctatgaatgaaggacatttt
aaggacctcctttttgaactggtcccaccacccgctcagagggcgctaacgcgcaccatg
ggcgcaccatccgctagcctctctgcggatctcatgatgatgggctttccgacccgatta
ccggaagcatccgcgccgacgttatgtgtctgtcatgcggagttaaagagtcaaggtttt
ctatgcccccgctgccttgctaaagtgtgcgatgtgccaacggactgccatgtctgtgga
ctcatgattgtaagctcacctcatttggcaagaagctaccatcacctcttccccgtgaaa
ccctatgatgccgtaccaaacttggaagatatacctcagccctcggatgcgtgtcatggt
tgcgcaaaactctttccgacgacaacgtcaataccgattggggaaggtgtgagtgtagtg
ggtagatacagatgcccggactgccgacacgatttttgctcggactgtgatgtctttgta
catgaagtgatacactgttgtccaggatgtgggaagtag
DBGET
integrated database retrieval system
