Acinetobacter calcoaceticus: BUM88_01960
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Entry
BUM88_01960 CDS
T05452
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
acal
Acinetobacter calcoaceticus
Brite
KEGG Orthology (KO) [BR:
acal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acal03009
]
BUM88_01960
Enzymes [BR:
acal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BUM88_01960
Ribosome biogenesis [BR:
acal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BUM88_01960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
CRISPR_Cas9_WED
Motif
Other DBs
NCBI-ProteinID:
AQZ80479
LinkDB
All DBs
Position
408322..409254
Genome browser
AA seq
310 aa
AA seq
DB search
MNSTQQWQSVTWFEVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIRESQVRVNKKRVKAET
KLEIGDQIRVAPIRYEQKDETTAPVSDNVAQSLLSRIVYEDEGLLVVNKPSGIAVHGGSG
MAYGLIEALRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDMLREHKIRKTYAAI
VKGQVSLDKQLIDAPLLRYELANGERRVRVTKDGKPSKTEWVVAERFKNATLIHASPLSG
RTHQIRVHGLSIGHPLIGDDKYGHTTAYTGPEARRLCLHAMRLDIPGYPPIEAPLPEDMT
QLLKTLRVAK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaattctacacagcaatggcaaagtgtcacttggtttgaggtggatgaacatcaagca
ggacagcgaattgataatttcctgttctcgcgtttaaaaggtgtacctaaaagtcgtatt
tatcgtttgattcgtgaaagtcaggttcgagtaaataaaaaacgtgttaaagctgagact
aaacttgagattggcgatcagattcgtgttgctccaattcgttatgaacaaaaagatgaa
acaaccgctcctgtcagtgacaatgtagcacaaagcttgttaagccgtatcgtctatgaa
gatgaaggtctactagttgttaataagccttcaggtattgctgtccatggtggcagtggt
atggcatatggtttgattgaggcattacgcgcagcgaccggcaaaaaatatttagaactt
attcatcgtattgaccgtgatacttcaggtctggtcatgattagtaaaaaacgtagcact
ttaaaactactacaagatatgttgcgtgagcacaaaattcgtaagacctatgctgcgatt
gttaaaggtcaagtgagcctagataaacaactgattgatgcgcctttattgcgatatgag
ctggcaaatggcgagcgtcgtgtacgtgtgactaaagatggcaaaccaagtaaaactgaa
tgggttgtagcagagcgctttaaaaatgcaacattaatccatgcgtcacctttgtcaggt
cgtactcatcagatccgtgtgcatggtttaagcattggacacccgttgattggtgatgat
aaatatggacacactactgcgtacactggccctgaagcacgtcgtctatgtttacatgcg
atgcgtttagatattccgggttatccaccgattgaagcgcctttaccagaagacatgacc
cagttattaaagactttgagagtggcaaaatga
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