Antrostomus carolinensis (chuck-will's-widow): 104526998
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Entry
104526998 CDS
T08541
Symbol
DDX46
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104526998 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acar03041
]
104526998 (DDX46)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104526998 (DDX46)
Spliceosome [BR:
acar03041
]
Complex A
U2 snRNP components
U2 related factors
104526998 (DDX46)
Complex B
104526998 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104526998
NCBI-ProteinID:
XP_028941437
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MTEGKEEGGSVARCCRHYRKRSASRGRSGSGSRSRSRSPSDKRGKRGEDRRSRSRDRDRR
RERSRSRDKRRSRSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPS
KNRKTENRSRSKEKTDGVDVSKEKKKDKDDKEEEKDKDATTNTVATENFDQNKLEEEMRK
RKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVED
EELDPLDAYMEEVKEEVKKFNMRSVKGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGE
LMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELA
KMTQEEVNVYRLELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAI
PAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITK
ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRV
TYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQV
GGRSVVCSDVEQHVIVIEEEKKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRAS
YPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDY
VHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAE
GKLIKKSSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNS
KKRVKDMAAPGTSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQ
ATNAILRGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEE
LEINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANE
LAVQKAKAEITRLIKEELIRL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagggaaagaagaaggaggttctgtggctcggtgctgcaggcactatcggaag
cgctctgcctcccgtggccgctccggctccggcagccgttccagaagccgttctccatcg
gataagagaggaaagcgtggagaagacagacgctccaggagcagagatcgggaccggaga
cgcgagaggtcgcgcagccgggacaagaggaggtctcgatcgcgtgacagaaagcggcag
agacgttcaagaagcagagaaagggaacgtagcagagagaggagaagatcccggagccga
gagaggagacgctctagaagcaggagtagaggcagacggtctcgatcctccagtccaagc
aagaacaggaaaacagaaaacagatcaagatctaaagaaaagacagacggtgtggatgtt
tccaaagaaaagaaaaaagacaaagatgacaaagaggaggagaaggataaagatgccacc
acaaatacagtggccactgagaattttgatcagaacaaactagaagaagaaatgaggaaa
cgaaaagaaagagtggagaagtggcgggaagaacaacgcaagaaggccatggaaaacata
ggagagctgaaaaaagaaattgaagagatgaaacaggggaaaaaatggagtttggaagat
gatgatgatgatgaagaggaaactgcagaaggagaaaaagaaggcaatgaggttgaagat
gaagagttagatcctttggatgcttatatggaagaagtaaaagaagaggtcaagaaattc
aatatgagaagtgtgaaaggtggtgggagtgaaaagaagtctggaccaactgttaccaag
gtggtaactgtggtgacaaccaaaaaggcagctgcagagtcagaaaagaagaaaggggaa
ctcatggagaatgaccaagatgcaatggagtattcctcagaagaggaggaagttgatctt
cagactgccctgactggctaccagaccaagcagagaaagctgctagaaccagtggatcat
ggaaagatagaatatgaacctttcaggaaaaacttctatgttgaagtaccagaactagct
aaaatgacacaagaagaggtgaacgtgtacaggttggagctggagggaatcacagtcaag
ggaaaaggctgccccaaaccaataaaaacctgggtacagtgtggtatttccatgaagatt
ctcactgccctcaaaaaacatggctatgaaaagcccactcccattcaaacccaggctatc
ccagcaattatgaatggccgtgacttgattggcattgctaaaacaggaagtggaaaaact
attgcgtttctcttgcccatgttcagacacatcatggatcagagagcgttagaagaagga
gaaggtcccatagctgtgattatgacacctactcgcgagctggctttgcagatcaccaag
gagtgtaagaaattctcaaagacacttggacttcgagttgtctgtgtctatggagggaca
ggaatcagtgaacagatcgctgaactcaaaagaggtgctgaaattattgtatgtacccct
ggacgtatgattgacatgttagcagctaacaatggtcgggtgacaaacctccgtagagtc
acatacgttgtactcgatgaagcagacagaatgtttgacatgggttttgagcctcaggtt
atgcgcattgtagacaacgtcaggcctgatcgtcagactgtcatgttctctgctactttt
cccagagctatggaggcattagctcggagaatccttagtaaacctatagaagtgcaggtc
ggaggcagaagtgtcgtctgttctgatgtggagcaacacgttattgtcatagaagaggag
aagaaatttttgaagttactggagctcctgggacactatcaggagaaaggatcagttatc
atatttgtagataaacaagaacatgctgatggattgttgaaagatttaatgagagcctct
tatccttgcttgtctcttcatggaggtattgatcagtatgaccgggacagcataattaat
gatttcaagaatggaacttgcaaacttctagtggccacatctgtagcagcaaggggcttg
gatgtaaaacaattgatgctggtggttaattatagctgtcccaaccattatgaagattat
gtgcaccgagcaggccgaactggacgagctggcaataaagggtatgcatacacattcatt
actgaggatcaggcacggtatgctggtgatatcattaaggctttagaattgtccgggaat
ccaattcctactgatttggagaagctctgggctgacttcaaagaccagcagaaggctgag
gggaagttgattaaaaaaagtagtggattctctggcaaaggttttaaatttgatgaaaca
gaacaagctttggctaatgaaagaaagaagctacaaaaagcagcgcttggcttgcaagat
tcagatgatgaagatacagctgttgatattgatgaacaaattgaaagcatgttcaattca
aagaagagagtaaaagacatggcagcaccaggaacatcaaatgctcctacaccatcagct
gggaatgcagaaaaattggaaattgctaaaagattggctttgagaatcaatgcccagaag
aatcttggagcagaggcacaagtatttgtccctttccactttaaggatgtgatgcagcag
gctacaaatgctatcttgagaggaggcacaattcaagctcccactgtatctgccaagacc
attgcagagcaactggctgaaaaaatcaatgctaagctcaattatgtacccatagagaaa
caggaggaagagaaacaggacggaggacagaatgaatcctttaagagatatgaagaagaa
ttagagatcaatgacttcccacagactgccagatggaaagttacctccaaagaagcgctg
cagagaatcagtgaatattctgaagctgctattacaatcagaggaacttatttcccacca
ggcaaagaacccaaggaaggagaacgaaagatttatttggctatagaaagtgccaatgaa
ctggctgtacagaaagcaaaggcagaaatcacacgacttataaaagaggagctcatcaga
ttg
DBGET
integrated database retrieval system
