Antrostomus carolinensis (chuck-will's-widow): 104528531
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Entry
104528531 CDS
T08541
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04510
Focal adhesion
acar04512
ECM-receptor interaction
acar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104528531
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104528531
09142 Cell motility
04820 Cytoskeleton in muscle cells
104528531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acar04147
]
104528531
00536 Glycosaminoglycan binding proteins [BR:
acar00536
]
104528531
Exosome [BR:
acar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104528531
Glycosaminoglycan binding proteins [BR:
acar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104528531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104528531
NCBI-ProteinID:
XP_010170870
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MQGERGLPGLQGVIGFPGMQGPEGPPGPPGLKGDTGEPGLPGTKGTRGPPGVSGFPGNPG
LPGIXXXXXXXPGIPGCNGTKGERGPVGPPGLPGLTGSIGPPGPPGMKGDPGEVIGLLPP
SVLKGDKGFPGQPGLPGPPGTPGFQGPMGPQGPPGEPGPPGPPGLPGEKGYMGLGFQGPK
GEKGEQGVRGPPGPPGPAPHMKEKGSEFIRGEKGDPGEKGERGAPGIPGSGFKGEKGEPG
KPGPRGKPGKDGEPGPKGEPGLPGGFGIPGRPGEPGSKGDKGERGFPGPPGRVIDAGPVD
TFGEKGEPGVSGLPGLKGQKGEKGFPGIQGIPGPPGRPLPDRVGSPGVPGERGEKGEKGS
PGFSLPGPPGRDGFPGPPGLPGPPGPPGKTDGIDQCQQGEPGAPGSPGLPGRDGFPGEMG
EKGDKGEACALCDKVGPPGLPGPQGPPGPAGFPGQSGFKGDRGLPGLDGLPGVPGPPGTP
GLMGSPGAKGEPGDFTYDTILKGEKGDPGFPGQPGIPGREGRPGKDGLPGLQGPKGASGT
AGLKGERGPPGQPGFPGVRGERGFPGPPGVGAAGLPGEKGDRGFAGTPGLPGLPGAKGEA
GRTVPLPGPPGADGLPGPPGFPGPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPK
GFQGQPGSPGLPGTPGTPGLDGLPGVPGLQGQKGEPGVGLPGPKGLPGPPGPAGIPGEKG
SPGLPGLRGEQGFPGIPGQQGFRGDPGLPGLQGLQGPPGAPGLGPQGTPGPAGQPGPQGP
PGFPGIKGERGFPGIPGLDMPGPKGDKGSQGQPGVPGSVGLPGLPGPQGAVGLKGSAGPK
GEMGVMGTPGLPGTPGPVGDRGFPGEKGSQGFKGVVGPQGDPGVKGDKGEAGLPGKPGTM
DNMDMVSLKGQKGDQGEKGDHGATGEKGLRGEYGEPGIPGKDGEPGTPGHPGPKGDQGPP
GYPGDPGLPGQKGSVGEMGLPGTPGEKGLPGVPGSPGTPGFPGQKGEKGDKGAPGFPGIG
FPGSPGEKGEPGRTGSPGLSGDKGEKGSSGIPGMPGAPGPKGSPGMAGFPGNPGRHGEKG
EKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGAAGAKGEQGIPGRGLPGF
PGAKGDKGAKGDVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQGLPGLPGSAIEGPKGDR
GPQGQPGLPGLPGPTGPPGPPGLKGAKGEQGSSGWPGTPGSPGVKGDPGFQGLP
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagaaagaggcttaccgggactacagggtgtgattgggtttcctggaatgcaa
ggacctgaaggtcctcctgggccaccagggcttaagggtgatactggagaaccaggacta
ccaggaacaaagggaacaagaggccccccaggagtatcaggctttccaggaaacccaggc
cttcctggcattnnnnnnnnnnnnnnnnnnnnacctggcattccaggatgtaatggcaca
aagggtgaaagaggtccagtaggtcccccaggtttaccaggactgactgggagcatagga
cccccaggacctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcct
agtgtgctaaaaggtgataaaggctttcctggccaacctggactacctggtccacctgga
actccagggtttcagggaccaatggggccacaagggcctccaggagaaccaggtccccca
gggccaccaggactcccaggcgagaagggctacatgggcttgggctttcagggtcccaaa
ggtgaaaagggagaacaaggagtaagaggccccccaggcccaccaggaccagcaccacat
atgaaagaaaaagggagtgaattcataaggggagaaaagggtgatccaggtgaaaagggt
gaaaggggcgccccaggaattcctggttcaggtttcaaaggagaaaagggtgaacctggg
aagcctggtccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagaaccc
ggtttgcctggtgggtttgggattccaggacgacccggggagcctggttcgaagggtgac
aaaggtgaacgaggatttccaggacctccaggaagagtcatagatgctggaccagtagac
acctttggtgaaaaaggagagcctggagtttcaggtttgcctggactgaaaggtcaaaaa
ggtgaaaaaggtttccctggtatacaaggaatcccaggacctccaggtcgaccacttcca
gacagggtaggatcacctggtgtccctggagagagaggtgaaaaaggtgaaaagggttct
ccaggattctctttacctggaccgcctggaagagatggtttcccaggtcccccaggattg
cctggcccaccaggtcctccaggcaaaacagatggaattgatcaatgccagcagggagaa
cctggtgcaccaggtagtcctggacttccaggaagagatggatttccaggagagatggga
gagaaaggtgacaaaggtgaagcctgtgccttatgtgataaagtaggacctcctggactt
ccaggaccacaagggccaccaggtccagcaggttttccaggacaatcaggtttcaagggt
gacagaggcttacctggacttgatggccttccaggggtacctggcccccccggcactcca
ggacttatgggcagccctggggcaaaaggagaaccaggagattttacttatgatactatc
ctgaaaggtgaaaagggagatcctggtttcccaggacaaccaggtattcctggaagagaa
ggaagaccaggaaaagatggattgccaggtctccagggtccaaaaggagcatcgggtaca
gctggcttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggt
gaaagaggttttcctggccctcctggggtaggtgctgcagggttacctggcgaaaaagga
gacagaggctttgctggaactccaggtttaccaggccttccaggagcaaagggcgaagca
ggacgaactgtaccactccctggacctcctggggcagatggccttcctgggccacctggt
ttccctggaccccaaggtgacaaagggaatcctgggcttccaggtagacccggcctacca
ggagaaaaaggtgctgttggacagccaggtatagggttccctggacctccaggacccaaa
ggtttccaaggtcaacctggctcgcccggtctgccagggactccaggaacccctggcctg
gatggtttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacctggtgttggtctc
cctggccctaagggattgccaggccccccaggaccagctggcatccctggagaaaaagga
agtccaggactgcctggcttacggggcgagcaaggctttccaggcatacctggacagcaa
ggattcagaggcgaccctggcctcccaggactgcaaggcttgcagggccctccgggtgca
ccaggactgggccctcagggcacgccaggacctgctgggcagccaggaccccagggaccg
ccaggatttcctggaataaaaggagaaaggggcttccctggtatcccaggtctagatatg
ccaggaccaaaaggggataaaggtagccagggtcagcccggagtaccagggtctgtgggg
ttacctggcctgccaggtccacagggggctgttggactgaaaggatcggcaggaccaaaa
ggagaaatgggagttatgggaactcctggattgccaggaactcctggaccagttggagat
cgagggtttcccggtgaaaaaggtagccaaggtttcaaaggtgtagttggaccacagggt
gatcctggtgtcaaaggagataaaggtgaagctggtctcccaggaaaacctggaacaatg
gacaacatggacatggttagtctcaaaggccaaaagggagatcaaggagaaaaaggggac
catggagcaacaggagaaaaagggttacgtggggaatatggagaaccaggaattccaggg
aaggatggtgaacctggtacgccaggacatccaggaccaaaaggtgatcagggcccccca
gggtacccaggtgatccaggacttccaggacaaaaaggatcggttggtgaaatgggtttg
ccaggaacacctggagaaaagggtctgccgggagtaccaggttcaccaggcacaccaggg
ttccctgggcaaaaaggtgaaaagggagacaaaggagcaccaggttttcctggaattggc
tttccaggttctcctggtgagaagggagaaccaggaagaacgggtagtccaggtttatcc
ggagataaaggtgaaaagggtagttcaggaattcctggaatgccgggtgccccaggtccc
aaaggatcccctggcatggcaggatttccaggcaaccctggccgccatggagaaaagggt
gaaaaagggcttcctggcttaagtggcattccaggtttaaaaggagaaccaggtgaacct
ggtgttccgggtcctgctggttccattggacagaagggtgaaccaggttatgatgggatt
ccaggtgcagctggtgcaaagggggaacaaggtattccaggcagaggacttccaggattt
cccggtgcaaagggagataaaggtgcaaaaggtgatgtgggttttccaggatccccagga
agtccggggatcccaggcctgaaaggagaaccaggatatgctggtccaccaggccctaag
ggcagccaaggtcttcctggactaccaggaagtgcaattgagggccctaaaggagacaga
ggaccacaaggccagcctggccttccaggtttgccaggtccaacagggccaccaggaccc
ccaggtctgaaaggagccaaaggagagcaggggagcagtggctggcctgggactcctggg
agtccgggagtcaaaggtgatccgggtttccagggactgccg
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