Antrostomus carolinensis (chuck-will's-widow): 104529303
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Entry
104529303 CDS
T08541
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03250
Viral life cycle - HIV-1
acar04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104529303 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104529303 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acar03400
]
104529303 (SAMHD1)
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104529303 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
ODP
ERAP1_C
Motif
Other DBs
NCBI-GeneID:
104529303
NCBI-ProteinID:
XP_010171878
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
LPAERLKVLACLNKLRQQHMDIMKVFNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGG
TYFVFPGASHNRFEHSVGVGYLAGCLVRALKEKQPELDITQRDILCVEIAGLCHDLGHGP
FSHMFDGRFVPLTRPDFKWKHETASVEMFEHLITSNKLEEVMKSYGLVLEEDMNFIKEQI
GGPIDETACEKSWPYRGRQKEKSFLYEIVANKKTGIDVDKWDYFARDCHHLGIQNNFDYK
RLLKFIRVCEVKNQKHICIRDQEVGNLYDMFHTRNCLHRRAYQHKVGNIIEIMITEAFQK
ADKFLKIEGSGGKLYQISTAMEDMEAYTKLTDNIYLEILHSSCPELKEAREVLHKIERRE
LYKFLGETQPAAVREIVKNNSLAESIAKSKPEKDPPDVELKAEDFIIDVINMDYGMKEQN
PIDNVLFYCKADPSKAVKISKEQVSKLLPMTFAEQVIRVYCKSQDPDIVSAAKQYFVQWC
IENDFTKPQDSDVVAPHLTPMKKSWNNMRDDEHWTASEPSCRQRLPFDQ
NT seq
1591 nt
NT seq
+upstream
nt +downstream
nt
cctcccagccgagagactgaaagtgctggcctgcctgaacaagctgagacagcagcacat
ggacatcatgaaggtttttaatgacccaattcatgggcacattgaaatacatccccttct
cgttcgtatcatcgacacacctcagtttcagcgcctccgatacatcaagcagctgggtgg
cacttactttgtttttccaggagcctctcacaaccgctttgaacactctgtaggagtggg
ctacctagcagggtgtctggttcgtgcgctgaaggagaaacaaccagaactggatataac
ccagcgagatatcctctgtgtagaaatagctgggctttgtcatgatttgggtcatggccc
attttcacacatgtttgatggaagatttgttccactcactcgtccagatttcaagtggaa
gcatgagactgcttctgttgaaatgtttgagcacctgatcacttccaataaactagaaga
agtcatgaagtcgtatggtcttgtcctggaggaggatatgaacttcatcaaggaacaaat
aggagggcctatagatgaaaccgcttgtgagaaatcgtggccctaccgtggtcgacaaaa
ggagaaaagtttcctgtatgagatagtagctaacaaaaaaaccggcattgacgttgacaa
atgggattattttgcaagggattgccatcacctaggaatccagaataattttgattataa
gcgattacttaaattcattcgggtctgtgaagtaaaaaaccagaagcatatctgtatccg
tgaccaggaagttggaaatttgtatgatatgttccacacacggaattgcctgcaccggcg
agcataccagcataaggttggcaacatcattgaaataatgattacggaagcctttcaaaa
agcagacaaatttttaaaaatagaaggctctggaggaaaactgtaccagatttccacagc
aatggaggacatggaagcctacactaagctaactgataatatctacctggaaattctgca
ctcaagttgtccagaactgaaggaagcacgagaagttttgcataaaatagaacggcgtga
attatacaagtttttaggagagactcaacctgcagcagtgagggaaattgtaaagaataa
tagcctggcagaaagcattgctaaatccaagccagaaaaggatcctccagatgtggagct
aaaggctgaagatttcataattgatgttatcaatatggattatggaatgaaagaacagaa
tcccattgataatgttctcttctattgcaaggctgatccttccaaggcagtcaagatcag
taaggaacaggtttcaaagcttttacccatgacgtttgcagagcaggttatccgggttta
ttgcaaaagtcaggatccagatattgtttcagctgcaaaacagtattttgttcagtggtg
tatagagaatgatttcaccaaaccacaggatagtgatgtggttgcccctcatctcactcc
gatgaagaaaagctggaataacatgagagatgatgaacactggacagcttcagaacccag
ctgcagacagaggcttccttttgatcagtaa
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