Atta cephalotes (leaf cutting ant): 105624970
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Entry
105624970 CDS
T04923
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03022
Basal transcription factors
acep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105624970
09124 Replication and repair
03420 Nucleotide excision repair
105624970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105624970
03400 DNA repair and recombination proteins [BR:
acep03400
]
105624970
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105624970
DNA repair and recombination proteins [BR:
acep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105624970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
105624970
NCBI-ProteinID:
XP_012061702
UniProt:
A0A158NVZ4
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MHRDQSRTIAISRSVIFLPFPFSTFLILSPNPPRFVSTYPERGFSRIMAEEEFEEKEYRW
ETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQLERKQGARLGMMRHLYIILDASESM
SNQDLKPTRFLCSLKLLEDFIEEFFYQNPISQLGVIITRNKRAEKVSDLAGNSKKHIKEL
QILQQTVVGGEPSLQNSLEMATKLLKLLPSHASKEILVIIGALTTCDPGDINETIRNMKL
DSIRCSVIGLAAELYICKRMANITGGEHSVALDDKHYKEQLNAHIDPPPAATRLDAALVK
MGFPHHALHSNAPDTSITICMCHAHNSDETVKFMTTGYLCPQCLSKHCELPVECRACGLT
LVSAPHLARSYHYLFPVDPFKEIAPDSDYTICFGCQKAFAQKDKKVMAVIPFSY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcgatcaatcgcgaacaatcgcaatatcgcgatccgtaatcttcctgcccttt
cctttctcaacttttctcattctttccccaaacccaccacgattcgtctcgacctatccg
gagcgcggattttcgcggataatggcagaagaagaatttgaagaaaaggagtaccgttgg
gaaactggttatgaaaaaacatgggaagcaattaaggaagatgaccatggtctgttggaa
gcttctgtcgcagatattattcataatgccaagagaaaacgtcaattggaaagaaaacag
ggtgccagattaggaatgatgaggcatctttatatcattttagatgcttcggagtcaatg
tcgaatcaagatttgaaaccaactcgttttctgtgttctctaaagctcctagaagatttt
atcgaagaatttttctatcaaaatcctataagtcaattaggtgtaattataactagaaat
aaaagggctgagaaagttagcgatttggctggtaactcaaagaagcacattaaggaattg
caaattttgcaacaaactgtagtaggcggtgaaccttctttgcaaaattctttagaaatg
gcaacaaagttattgaaattattaccgtcgcacgctagtaaagaaatattggtaattata
ggggctttgactacatgcgatcctggagatatcaacgaaacaataagaaatatgaaattg
gacagcattagatgtagcgtaataggattggccgctgaattatatatctgtaaacgaatg
gcaaacattaccggtggcgaacatagtgttgcgctcgatgataaacattacaaggagcaa
ttgaatgcacatatagatcctccgcctgctgcaacgcgattagatgcagcgcttgtgaaa
atggggtttcctcatcacgctctacactctaacgcgccagatacatctataacaatatgt
atgtgccacgcacacaattctgatgaaacggttaaatttatgactaccgggtacctttgt
ccccagtgcctcagtaaacattgtgagttacctgtggaatgtagagcttgcggtcttact
ctagtatccgctccacatttagcccgatcgtatcactatctatttcctgttgatcctttt
aaagaaattgcacctgatagtgattatactatctgctttggttgccaaaaagcttttgct
caaaaggacaaaaaggtaatggctgtcattcctttttcatactag
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