Atta cephalotes (leaf cutting ant): 105627099
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Entry
105627099 CDS
T04923
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03022
Basal transcription factors
acep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105627099
09124 Replication and repair
03420 Nucleotide excision repair
105627099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105627099
03400 DNA repair and recombination proteins [BR:
acep03400
]
105627099
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105627099
DNA repair and recombination proteins [BR:
acep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105627099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
105627099
NCBI-ProteinID:
XP_012063771
UniProt:
A0A158P1W3
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSSTITGKNLLRPNSLQCTNLQEYLKSRSPDTLNKLYHKPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLYFEEHQKVVQVLNELYVWKEASIPGGLPGWTLNSTFKKNL
KIVLLGGGKPWTMSNQLETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPIITQAGFQFLLLDTASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGETKPL
TRDTDKEGYIIVETNYRIYAYTNSNLQVALLGLFCEMLYRFPNVVVSILTRDSVRQALKS
GITASQIVGYLRQHAHSKMIEAGPPILPPTIVDQIKLWENERNRFLFSEGVLYSQFLSQT
DFEVLRDHAVSIGVLIWQSERKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtacaataaccggcaagaatctgttacggccaaatagtttacagtgcacgaat
ctacaggaatatttaaaatctcgtagtcctgacactctgaacaaattgtatcacaagccg
cctatatgtctagctgtattccgcgagttgcctgttattgccaagcattatgttatgaga
ttgttgtttgttgagcaaccagtaccacaggcagttatagcatcctggtgctccaaactc
tatttcgaggagcatcagaaggtggtacaagttttgaatgagctatatgtatggaaggaa
gcgtccatacctggtggactacccggttggactttgaacagtaccttcaagaagaactta
aagattgtattgctgggtggcggcaaaccatggactatgtccaatcaactagaaactgac
agtaagccgagagatgtggcctttttggattcttatgcgttggaaaggtgggagtgcgtc
ttacactacatggttggttctcagcagcaggagggcatatctgccgatgctgtaaggatt
cttttacatgccggtttaatgaagagagacgaagctgatggaagcccaattataacgcaa
gctggttttcagtttctgctcttagatacagcttcgcaggtatggtattttattctacaa
tatcttgacacaattgaagcacgtggtcttgatttggtagaatgccttacctttctgttt
caattaaatttttccaccctcggtaaagattatagtaccgaaggcatgtccgaaggactc
ttaacatttttacaacatttaagagaatttggacttgtatatcaacgaaaacgaaaagca
ggaaggttttatccaactcgattagcgttaaacattgctactggtgaaactaaaccttta
accagagatacagacaaggaagggtatataattgtggaaacaaattatcgaatttatgct
tatacaaactcgaacttgcaagttgcactgcttggactcttctgtgaaatgttatatagg
tttccaaatgtagttgtttcgatattaacaagagattcggtaagacaagcattgaaaagt
ggaataactgcttctcaaatagtaggctatttgcgacaacatgcacatagtaagatgata
gaagcaggaccacctatattaccgcctacaattgtagatcaaattaaattatgggaaaat
gaaagaaatagatttttgttcagcgaaggagttttatatagtcaatttctttcacaaact
gacttcgaagttctcagagatcatgcggtctcaatcggagtattaatttggcaaagtgaa
agaaaaagaacgatggtggttaccaaagctggtcacgatgatgtaaaaaagttttggaaa
cgatattcaaaaggctcaagttaa
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