Atta cephalotes (leaf cutting ant): 105627513
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Entry
105627513 CDS
T04923
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105627513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acep03041
]
105627513
Enzymes [BR:
acep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105627513
Spliceosome [BR:
acep03041
]
Complex A
U2 snRNP components
U2 related factors
105627513
Complex B
105627513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105627513
NCBI-ProteinID:
XP_012064183
UniProt:
A0A158P325
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSAEPEKKRRRSRSRDRERERDKGRHRERRSRSRDRDRE
RSDRRERSERDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDNEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWS
LEDDSDEETPVVQNNKEAKEEGAKEEIEEVNEEVKDKEEEIDPLDAFMAEVQEEVRKVNK
FDGKAPKNANNGTNSASQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEVYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIAKPTATSVTVPGQP
IPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDVETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtagcgacaaagacagacatcaccggcggagatcgaggtcgagatcgcga
tcgagatcggccgaacccgagaagaaacgacggcgatctagaagcagggaccgagagagg
gagagagataagggacgacatcgagagcgaagaagtcgttcgcgggatagagacagagag
aggagtgacagaagggaacgttccgagagggacagagatcgcgagagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcaaaatcttcgcgctctggcaaagaacgatcgaac
agatcccgttcccgtgatagaaaggataaagagaagggggacaatgaggaattacctttt
gatcacacaaaattagacaaggaggaagagcaaaaaaggttggaattggaaatgcaaaag
agaagagagaggatagaaagatggcgagcagaaaggaagaagaaagaactggaagcaacc
aaaaaagacggtaagacatctattttggcaaatcttcagctacccatgaaaaagtggtcc
cttgaggatgatagtgatgaagagactcctgtggtacagaataacaaggaagcaaaagaa
gaaggtgcaaaggaagaaattgaagaagtaaatgaagaggtaaaagataaggaggaggag
attgatccacttgatgcttttatggcagaggtccaagaagaagtgagaaaagtgaataaa
tttgatggtaaagctccaaaaaatgccaataatggcactaattctgcatcacagagtggc
ggggtagtcattgtaactggagtagctaagaaaaaagtgcagaaacagaaaggagaactg
attgaacaaaatcaagatggattggagtattctagcgaagaagagggcgagaatcttcac
gagactgcggccggtatagcaaataaacagaagcgagaattagctaaagttgatcatgct
acaacagagtatcaacccttccgaaagtctttctatgttgaagtgcctgagatagcaaga
atgacaccagaagaagtagaagtgtataaagaagaattagaaggtattcgcgtaaaaggt
aaaggttgcccaaaacctatcaaatcttgggcgcaatgtggcgtaactaagaaggaatta
gaagtactaaagaaactcggttatgagaaaccgacacctattcaatgccaggcgattccg
gcaatcatgtctggtcgcgatctcataggtatagcgaaaaccggtagcggaaaaacgcta
gcttttcttttacctatgtttcgtcacatactcgatcagccaccattagctgatggtgac
ggaccaatcgcgttgattatgacaccaactagagaattgtgtatgcaaattggtagggat
tcaaagaaattcacgaaatcgctgggtctttcgcacgtgtgtgtctatggtggaaccggc
atttctgaacaaatagcagaacttaagagaggagctgaaatcattgtgtgcacaccagga
aggatgattgacatgcttgctgctaacagcggacgagtgaccaatttacgtcgagtaacg
tatgtagtacttgatgaggccgacagaatgtttgatatgggtttcgaaccgcaagtgatg
cgaattatggagaatgtaagaccggatagacaaacggtactgtttagtgcaacgttccca
cgacaaatggaggcgctagccagaagaatacttacgagaccagtcgaagtacaagtcggt
ggacgttctgtcgtttgcaaggatgtggagcagcatgtagttgtactcgaggaagatcag
aaattttataagttgcttgagattcttggacattatcaagacaaaggttccaccattata
tttgtagacaaacaagagaatgcagacacgttgctcaaggatcttatgaaagcttcatat
tcctgcatgtctcttcacggcggtatagatcaatgcgacagagattcaaccatattggac
ttcaaagcgggacgaacaaaattgctcgtggccacgtccgtcgccgctagaggcttggat
gtcaaacatttggtattagttgtcaattatgattgtcctaatcattacgaggattatgta
cacagatgtggtagaactggccgcgctggaaataaaggatacgcgtatacttttattaca
tcagagcaagaacgatacgctggtgatattttacgtgcgcacgagttagcgggcgtacct
gttccagaacccttgcgccaattatgggaaggttacaaagcccgccaagccgcggatgga
aagaaggttcatactggaggtggtttcagtggcaaaggatttaagtttgacgaatcagag
gctgctttggcgaatgaaaagaagaaattccaaaaagcagctttgggactgcaagattcc
gacgacgaggacatagaaaacgatatcgaccaacagatcgagagcatgctagcgcctaag
cgaactgttcgtgaaattgcgaaaccgaccgcgactagtgttacagtgcccggtcaacct
attcctagtgccactgataaactcgaattggccagaagactggcgtcgaagataaacatt
gcaaagaatctgggcgctgaagcgaaaggcgctactcaacaagcagcggaagccatatta
aagggtgcaggacctaccaatcttatcacggcaaagacagtcgcggaacaactagcagcg
aaactgaatactaaattgaattatcagccacgcgaagaagatctcgtagaaagtgatgtg
gaaacgggtgagcaaacattccgcaagtatgaagaggaactcgagatcaacgacttcccg
caacaagcgagatggcgagtcacaagcaaggaggctcttgctcaaatctcggaatattct
gaggcaggtctgacagtgagaggaacgtacatcgcacctggaaaaacgccaccagaggga
gagaggaaattatacctggcaatagaatcaacgagtgagttggcagtcagcaaggccaag
gcggaagtgtctcgactcatcaaggaagaacttattaaactgcaagcgtctggtgctcac
actgcatcgcgaggtcgctataaagttttataa
DBGET
integrated database retrieval system
