Achromobacter sp. B7: DVB37_03705
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Entry
DVB37_03705 CDS
T05703
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein VgrG
Organism
achb
Achromobacter sp. B7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
T6SS_Vgr
Phage_base_V
Sarcoglycan_1
DUF6484
Motif
Other DBs
NCBI-ProteinID:
AYD63106
LinkDB
All DBs
Position
complement(815105..823681)
Genome browser
AA seq
2858 aa
AA seq
DB search
MNTTPSNPSSASAYSSMNIATLSQQARMLRVSTPLDAELVPEQMTLREGVSRLFALTLDC
LAASAELDVSGLLGKEITVSLLQADGSMRRWHAVVEGVDALGADGGLARYRLHAAPWMAA
LALRRDSFIYQDQSVQDIVSDIFADYPQAAFAFDVSEALPARPACTQYRESDLQFVQRIL
AEAGLSYRFEHQQDDGQAAGGGARHRVVIFDAGAARPEDPASPLRFHRSDATETRDSITH
FSAAQSVRPNAVARAAWNERTLTAHAAQSRSPVQVEALPVLEDYDYAGHGRYADDEAAEQ
SAARSLRAHESRIVRFEGAGTARSLAPGRLFAMTQHERYAEGGGGQAVDELGGNRYVVLE
VVHEATNNLGAQAPQVASSADMERGTYRNRFTAQPEAAALMPAWRPRPTAPEGLAAVVVS
AGDAPITSDRDLRVKVQFPWQRGDKPVTGGLPHKTHGDASGNAPGDDRSGTWLRVASAQA
GPNWGAHHLPRGGTEVIVEFIDGDIDRPVVAGQLYNDADLPPWSAGENAEANHAGVLSGW
HSHGLDGAGRNQWVFDDTRGKLRTRLASSTAATQLGLGHLVEQDLDDANRGQWRGTGFEL
RSDAWTVVRSGQGMLVSSTAREQAKSTQADAQEALLLLRGAQDASRRLNDSAGQHQARTM
AAADGYDELLAALDPQQDGRYPAQINGQAAGKAANGQRTDSAAVERINGPHLLIDSPNSL
NLATPASAVLHAGKHLHATAQSDAHVSAQQTYSAVSARSASVFAQQGPIRAISAQAPVSL
HAHTDILEALAGQDITVTSSAEGIEILGNQRVTLQAAGGSVTLDGADIVFKGPGLFSVKG
ATHNFVGPASDAANLPALPSTTVDDPLIVSAELVHKDGATASAVKKAASGLMAGFGGAAG
AGAGTGLGALGDAMPSGLASLGQTAAGAASKLSQLAGQANTLAGLAKNPMGALSAAPGLL
GNASPAMGGLLNTAKNTMGMVSQAQGMVAQAKAMVANPMSALPAASGMLGSVAPGASGMI
DSAASAAGTVSQAAAFIKNPSAALPAATDMLAAVAPEGASGMISGAATFAGVGSGAGATS
VASATPAATGTPSAATAGTASAPQASAASSAADPSGAPSPALASASPDASASPSGAGAGA
GAGAGASAGAGGGTVAGASASASASAGAGAAPVANSSVSVAPAPTTGAASTAANATATAD
AGGATSASGPAGVVASAPPTAGTGAPVSSASAAGTAPVNATGTSSVATSAPSAVATPDAP
ASDSLIANTGAPSVADAAGSSAAPSIAVASASTVAPSITAAGASTVAPSIAAAGAASATP
SITAASASAVISGGASSGAASIAAAGAATGASSFAASVASTTPSFGASAVAGASDTFVSP
TADVAVSPASAALVSASTESIALPGDVVSAASVQAGPAAGDFTGAATSSPPSIATDLGMT
AATAVNAAYSGAVSSGDAYNAASSHVDSSHVAASNAAAPNAAPSNAASFNGASPPPATLA
AASAHAASQVGALAGTGAASVAATAARASATAADGASPLTTDLPPGSGAATFTAGSATNH
GIGLLTTVAATIGAAPTLRVQEPRQGHAVDDRPADASASSAASLAAGSTATIAGTANAQG
HGHAPSTPSSPDTHVAPGSGAPDTQLVQASVDDDQRKQVDETSAAATAQPSPSFATAAAT
TQSSPTSASAAVGTQSSPSFAASVSPGQQGAASVTASAHPRDTRDTSTLPNATLLATVTA
SAGTLLAGAANAAGNTAAAASSAAVAGGALSDPATLATVVPQPSGALHGFSWPGAVNGAS
PSSAGTVTQGDQLAQLTSTGRDAGSATGLSADVSAGIPAGMPVEVPTNVSAGMPVEVPAN
VPAGMPVEVPANVSANVPADVSANVSAHAAGVAAPDGGALIASSDTLPATGGLSGDGPAV
AAGIPTQTPGFVPASQSTLPQGAGLPGGSGEGGLNFPSNPSSAGASATSGVGGIGAGAAA
GLGGSGGSTAGSTTAATSAATGSAGSAATSAAAPAAASPVVATSAAGATPASVTATTAAG
DSSVASVAGSESGSTASAGAGVNTAPSAADASSTGTVGGTANAATAAGAPATPSAAPTAD
ATSSASAGTSTSAPAHAAGGPSGSATTTASAASANGASTPTSASPAGSAPLGKAPAATPP
APASTAATAAPATPDANLGSATARAAGMSDSTPATRATDLSATAGAGAGASAAASSAGSS
GAVGIGAVAAGGGLATFAQQASAASTALSSASTFAAGGVSANVGAAIVPVMTQALNAGGD
RMAALSSAVDTLFTLPDVKQANIPSVAGAILSMPGLSSSSMPSVIGAILQSPTLATETLP
KVAEVLMKIPGVAESPLPQIARDVLDSVGLGPVARTQGTNLPGGTPPAGGSGRAVPGVST
YRARQDGARLQYVNLEQVAERWNDGSALTTTERQSNRPRIHVEFNRPGQHRFTITVKADP
ANIPYSARERGRRASYQEPHSNPRSYVTNADGTRIVDDITLPAAGLNLYLFEVRDERGQL
IKTERVETVRRLYIQEVMCMSAHPAGHLADVTPVTAEFALHGIDMIQLPRLQFRGRSAVD
AADTVESQQAIMNAVRAVYAPSPGKQREPYTLVVCHVDRLAAPGVSGDMRLPVPAGPGGR
VMTVPIVNDDRSRSSLWYEFDASDDWLVHARYIHTDASGAERSIPIPRHLITPIRESNGS
VWSVSVDLTRISPTPLTGMLNIQFNTVAASYAGLAITGTNLLFVSTLDPYEPNSQAYLTE
TLAHEMGHLLGMVPSGPDWPGLRNQDESADDSKLDPPPHFYYNAGGHCYYGLPDQNGEYN
EEIGQCVMYGITCANIHFCPSCSKAVRKVDCSEGWTAF
NT seq
8577 nt
NT seq
+upstream
nt +downstream
nt
atgaacactacgccttcgaacccgtcaagcgcctcggcctactcgtcgatgaacatcgcc
accttgtcgcaacaggcgcgcatgctgcgcgtcagcacgccgctggacgctgaattggtg
cccgagcagatgacgctgcgcgaaggcgtgtcgcgcctgttcgcgttgacgctggactgc
ctggccgccagcgccgagctcgatgtaagcggcttgctgggcaaggagatcaccgtcagc
ctgttgcaggcggatgggtcgatgcgccgctggcatgccgtggtcgaaggcgtggacgcg
ctgggcgccgatggcggtctggcccgctaccgcttgcacgccgcgccgtggatggccgcg
ctggcgctgcgccgcgacagcttcatctaccaagatcagtccgtgcaggacatcgtcagc
gacatctttgcggattatccccaggcggccttcgcgttcgacgtcagcgaggcattgccc
gcgcgcccggcttgcacgcagtaccgcgagtcggatctgcaattcgtgcagcgcatcctg
gccgaggcgggcctgtcgtatcgcttcgaacaccaacaggacgacggccaggcggccggc
ggcggagcgcgccatcgcgtcgtgatcttcgatgcgggcgcggcgcggcccgaagacccg
gcctcgcccctgcgttttcatcgcagcgacgccactgaaacgcgcgacagcatcacgcat
ttttcagcggcccagtccgtgcgcccgaacgccgtggcgcgcgccgcctggaacgaacgc
acgctgaccgcgcatgccgcgcaaagccgctcgccagtgcaggtggaagccctgcccgtg
cttgaggattacgactacgccggccacggccgttacgccgacgacgaggccgccgaacaa
agcgccgcgcgttcgttgcgcgcccacgaatcgcgcatcgtccgcttcgaaggcgcgggc
acggcgcggtcgctggcccccggccgcttgttcgccatgacgcagcacgaacgctatgcc
gagggcggcggcgggcaggcggtggacgagctgggcggcaaccgttacgtggtgctggag
gtggtgcacgaagccaccaacaacctgggggcacaggccccccaggtggcaagcagcgcc
gacatggaacgcggcacctatcgcaaccgcttcacggcccagcccgaggcggccgcgctg
atgccggcgtggcgcccgcgcccgaccgcgccggaaggcctggcggcggtggtggtcagc
gccggcgacgcccccatcacgtccgaccgcgacctgcgcgtgaaggtgcagtttccctgg
cagcgcggcgacaagcccgtcacgggtggcctgccgcacaagacgcacggcgacgccagc
ggcaacgcaccgggcgacgaccgctcgggcacgtggctgcgcgtggccagcgcgcaagcg
ggccccaactggggcgcgcatcatctgccccgtggcggcaccgaagtcatcgtggaattt
atcgatggcgatatcgacaggccggtggttgccggccagctatacaacgacgcggacctg
ccgccctggtccgctggcgagaacgccgaagcgaatcacgccggcgtattgagcggctgg
catagccacggcctggacggtgcgggccgcaaccagtgggtgtttgacgacacgcgcggc
aagttgcgcacgcggctggccagctcgaccgccgccacgcagctgggcctgggccatctg
gtcgaacaggacctggacgacgccaaccgcggccaatggcgcggcacgggctttgaactg
cgctcggacgcgtggacggtcgtgcggtcgggccagggcatgctggtgtcgtccaccgcc
cgcgaacaggccaagtccacgcaggcggacgcgcaggaagccttgctgctgctgcgcggc
gcgcaagacgcatcgcgccgcttgaacgacagcgccggccagcatcaggcgcgcacgatg
gcggcggccgacggctatgacgaattgcttgccgcactggacccgcaacaggacggacgc
tatccggcccaaatcaacggccaggccgccggcaaggccgccaacggccagcgcacggac
tcggccgccgtcgaacgcatcaacggcccgcacctgctgatcgattcccccaattccctg
aacctggccacgccggccagcgccgtgctacatgcgggcaagcacttgcacgccaccgcg
caatcggacgcgcacgtgtccgcgcagcagacgtattcggcggtgtccgcgcgctcggcc
agcgtgttcgcgcagcagggccctatccgggcgatctcggcgcaagcgcccgtgtcgctg
cacgcgcataccgacatcctggaagcgctggcgggccaggacatcaccgtgacgtcgtcg
gccgaaggcatcgaaatcctgggcaaccagcgcgtaaccctgcaagccgcgggcggcagc
gtgacgctggatggggccgacattgtgttcaaggggccgggcctgttctcggtcaagggc
gccacgcacaatttcgtgggtccggccagtgacgcggccaacttgccggccttgcccagc
accacggtcgacgatccgctgatcgtcagcgccgagctggtgcacaaggacggcgccacg
gcgtccgccgtcaagaaggccgcgtccggattgatggccggtttcggcggcgcggcggga
gccggcgccggcaccgggctgggggcactgggcgatgccatgcccagcggcctggccagc
ctgggccagacggcggcaggcgccgcctccaagctgtcgcagcttgccggccaggccaac
acgctggccgggctggccaagaacccgatgggcgcgctgtccgccgccccgggcctgctg
ggcaacgccagccccgcgatgggcgggctgctgaacaccgccaagaacacgatgggcatg
gtctcgcaggcgcaaggcatggtcgctcaggcaaaggccatggtcgcaaaccccatgtcg
gcgctgcccgccgcctccggcatgctgggttcggtggccccgggcgccagcggcatgatc
gattccgccgcgtcggcggcgggcaccgtgtcgcaagcggcggccttcatcaagaaccct
tcggcggcattgcccgccgcgacggacatgctggctgccgtcgcgccggaaggcgcgtcg
ggaatgatttccggagcggcgacgttcgcgggggtgggatcgggggctggagcgacgtcc
gtggcaagcgccacgccggcggcgactggtacgccaagcgcggcaactgccggtacagcg
tctgcgccgcaagcatctgccgcgagttccgctgcggatccctccggtgcgccctcgcct
gcgcttgcgagcgcatcgcctgacgcatcggcatcgccctccggggctggtgctggggct
ggggctggggctggggctagtgctggtgcgggcggtggaactgttgctggtgctagtgct
agtgctagtgctagtgctggcgctggcgcagcgccggtcgcaaacagcagcgtgtcggtc
gcgcccgcgccaacgacaggtgcagcgtcgacggctgcgaacgctaccgcgaccgccgac
gcaggcggcgcgaccagcgcctccggtcccgctggcgtcgtagcgtctgccccgccaact
gccggcacgggcgcacccgtgtccagcgcttccgccgcaggcacggcacccgtcaacgca
accggtacctcgtccgttgcgacgtcggccccgtctgctgttgcaacacccgatgcgccc
gccagcgattccctgatcgcgaacactggggcgccctccgttgccgatgcggccgggtcg
tcggccgccccttcgattgccgtcgcaagcgcatccacggtcgcgccttcgatcaccgct
gccggtgcgtctacggtcgcgccttcgattgctgctgccggtgctgcgtcggccacgcct
tcgattacggctgcgagtgcgtccgcagtcatatcgggcggcgcgtcttctggcgccgcc
tcgattgcggcggctggggcggctaccggtgcttcgtcattcgccgcttcggtagcgtcg
acgacgccttcattcggcgcgtccgcggttgcgggcgcttcagacactttcgtatctccc
acggcggacgtggccgtgtcgccggcttcggcggccctcgtctcggcgtccacggaaagc
atcgcgttgccgggcgacgttgtgtcggccgcgtcagtgcaagccggaccggcagccggc
gacttcaccggcgccgctacgtcgtcgccaccatccatcgcgacggacctcggcatgacc
gccgcgaccgccgtgaacgcggcctacagcggggcagtctcctctggcgacgcctataac
gcagcctcttctcacgtcgactcgtctcacgtagccgcttctaacgccgccgcacctaac
gccgccccttctaacgcggcatctttcaacggcgcatcccctccccccgcgaccttagcg
gcagcatccgcccacgcagcatcgcaagtcggcgcgctggcgggtaccggagctgcttcg
gtggccgcaaccgccgcccgcgcgtcggccacggcggcggacggagcttcgccgctgacg
acggatctgccgccggggtccggcgcggcaacctttacggcaggttcggcgacgaaccat
ggcatcggcttgttgaccactgtggccgcaacgattggcgcggcccccacgctgcgcgtg
caggagcctaggcaaggccatgccgttgacgaccggcccgctgacgcatccgccagttcc
gcagcctcgcttgctgcgggatcgaccgcgacgatagccgggacggcaaacgcccagggc
cacggacatgcgccgtcgacgccgtccagccctgacacccacgtcgcgccagggtccggc
gcgcccgacacccagctcgtccaggcaagcgtcgacgacgaccagcggaagcaggtcgac
gagacatcggccgccgcaacagcgcagccatcgcccagcttcgcgaccgccgcggcaaca
acgcaatcgtcgcccacctccgcgtccgccgcagtggggacgcaatcgtcgccctctttc
gctgcgtccgtgtctcccggccaacaaggcgcggcctcagtcacggcatccgcgcaccca
cgcgacacgcgcgacacgtcgactttgccgaacgctacgctgctcgcgaccgtgaccgcc
agcgcgggcacgctgctggccggcgccgcaaacgcggctggcaatacggcagccgcagca
tcttcggcagccgttgctggcggcgcgctgtctgacccggctacgctggccaccgtcgtt
ccgcagccctctggcgccttgcacggattcagctggcccggcgccgtgaacggcgcatcg
ccgtcctctgccgggaccgtgacgcaaggcgaccagcttgcgcaattaacgagcaccggc
cgagacgcaggttcggcaacgggactttcggccgacgtctccgccggtatccccgctggt
atgcccgttgaggttcccactaacgtctccgctggtatgcccgttgaggttcccgctaac
gtccccgctggtatgcccgttgaggttcccgctaacgtctccgctaacgtccccgcggac
gtctctgcaaacgtctccgcccatgccgctggcgttgcagccccggacggcggcgcgttg
atcgcatccagcgacaccctgccggcgacgggcggcctgtctggcgacggccctgccgtg
gccgccggcatccccacgcaaacgcctggcttcgtccctgcctcgcaaagcaccctgccg
cagggcgcgggcctgcccggcggctcgggtgaaggcggcttgaacttccccagcaacccc
tcatcagcgggggccagcgcgacatccggcgttggcgggatcggcgcaggcgcggcagcg
ggcctgggaggctccgggggcagcacggctggctcgactacggcagcgaccagcgccgcg
acgggctccgccggcagcgctgcgacctccgccgccgcgcctgccgcagcctcacctgtc
gtagcgacaagcgcagccggagcaaccccggcaagcgtcaccgcgacgaccgccgccggg
gactcgtccgtcgccagcgtcgcgggaagcgagtccggctccacggcgtcggcaggcgcg
ggcgtcaacacggcgccctccgcagcggacgctagctcgaccggcaccgtcggcggtacc
gcgaacgcagctactgcggctggtgcaccggcgaccccctcggccgcccccacggcggac
gctacttccagcgccagcgccggcacttccaccagcgcgccagcccatgcggccggcggc
ccatcgggcagcgcaacgacaacggccagcgccgcctcggccaacggcgcgtccactccc
acatcggcttcgcccgccggcagcgcgcccttgggcaaagcccccgccgcaacgccaccc
gccccagccagcacggcggccaccgctgcgcctgccacgccggatgcaaacctgggtagc
gccaccgcgcgcgcggcgggcatgtccgacagcacgccggccacccgcgccaccgatctg
tccgccacagccggcgcgggtgcgggcgcgtccgccgctgcttccagcgccggcagttcc
ggcgctgtgggcatcggcgccgttgcggccggcggcgggctggcgacctttgcgcaacag
gccagcgccgcgtccaccgcgctgtccagcgcatccaccttcgcggcgggcggcgtcagc
gccaacgtgggcgcggccattgtgccggtcatgacgcaggcgctgaacgccggcggcgac
cgcatggcagccttgagttccgccgttgacacgctgtttacgttgcccgacgtcaagcaa
gccaacatcccgtcggtggcaggcgccatcctcagcatgccgggcctgtcatcgtcgtcg
atgcccagcgtgatcggcgccatcctgcaatcgcccaccttggccaccgagacgctgccc
aaggtggccgaggtgctgatgaagatacccggcgtggccgagtccccgctgccgcagatc
gcgcgcgacgtgcttgactcggtcggcctgggacccgtggcgcgcacccagggcaccaac
ctgcctggcggcacgccgcccgccggcggctccggccgcgcggtgcccggcgtgtccacc
taccgcgcccgccaggacggcgcgcgcctgcaatacgtgaacctggaacaggtggccgaa
cgctggaacgacggcagcgcgctgaccaccaccgaacgccaatcgaaccgcccgcgcatc
cacgtggaattcaatcgccccggccagcaccgcttcaccatcaccgtgaaggccgacccc
gccaacattccgtactccgcgcgcgaacgtggccgccgcgccagctatcaggaaccgcac
agcaacccgcgcagctacgtcaccaacgccgacggcacccgcatcgtcgacgacatcacg
ctgccggccgccggcctgaacctgtacctgttcgaagtgcgcgacgaacgcgggcaattg
atcaagaccgaacgcgttgaaaccgtgcgccgcctgtacatccaggaagtcatgtgcatg
agcgcgcatccggccggccacctggccgacgtcacgcccgtcaccgcggaattcgcgctg
cacggtatcgatatgatccagcttccgcgcctgcaattccggggccgctcggcggttgac
gccgccgacaccgtcgagtcgcagcaagccatcatgaacgccgttcgcgcggtctatgcc
ccttccccgggcaagcagcgcgaaccctatacgctggtcgtttgccacgttgaccgcctg
gccgcgccgggcgtcagcggcgacatgcggctgccggtgcccgccggccccggcggacgc
gtcatgacggtgcccatcgtcaacgacgaccgcagccgctccagcctctggtacgaattc
gatgccagcgacgactggctggtgcacgcgcgctacatccacacggacgcctccggcgcc
gaacggtcgattccaattccgcgccacctgatcacccccatccgcgaaagcaatgggtcg
gtctggtcggtgtccgtggacctgacccgcatatcgcccacgccgctgaccggcatgctg
aacatccagttcaacaccgtggccgccagctacgccggccttgccatcacgggcaccaac
ctgctgttcgtctcgacgctggacccctacgaacccaactcgcaggcctacctgaccgaa
accctggcccacgaaatgggccacttgctgggcatggtgcccagcggccccgactggccc
ggcctgcgcaaccaggacgagtccgccgacgattcaaagctggacccgccgccgcacttc
tactacaacgcgggggggcactgctattacggcctgcccgaccagaatggcgagtacaac
gaggaaatcgggcagtgcgtgatgtacggcatcacctgcgcgaacattcatttctgcccc
agttgcagcaaggccgtgcgcaaggtcgactgctccgaaggctggacggcgttctga
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integrated database retrieval system
