Aquila chrysaetos chrysaetos (golden eagle): 115349437
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Entry
115349437 CDS
T08023
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115349437 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
achc00536
]
115349437 (COL11A1)
Glycosaminoglycan binding proteins [BR:
achc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115349437 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
115349437
NCBI-ProteinID:
XP_029889606
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All DBs
Position
12:20475224..20639458
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AA seq
1858 aa
AA seq
DB search
MEMQRWSTRWKTRRWPWDSAVTMLITFAILLRAAEVRGAEPVDVLKALEFHNSPEGVSRT
AGFCTNRRDSKGSDVAYRVSKTAQLSAPTKQLYPGGDFPEDFSILMTVKPKKGIQSFLLS
IYNEQGIQQVGVEVGRSPVFLFEDQNGKPAPEDYPLFRTVNIADGKWHRVAISVEKKSVT
MIVDCNKKTTKPLERSDKTVVDTNGITVFGTRILDEEVFEGDIQQLLIIADPRAAYDYCE
HYSPDCDSPVPNAAQAQDPQVDEYTPEDFIEYDYEYGDADYKETDSVTEGPPLFEETIAQ
TEKKKGMVKKRKRTVAASSKDKPQKAITKKYEKYASKKKKSYQAATKGKLGVKVNIVDGF
QEYSIAENDYGPQTEAPSRTTEANEQNPAEEVFAEEYITGEDYDKKTEETEYGSRGVDLS
ESDLLVDGDLGEYDFYEYKEYEEKPTDSTNEEFGPGVPAETDITETSVTGHGAYGEKGQK
GEPAVIEPGMLIEGPPGPRGPAGLTGPPGLQGPVGPPGDPGERGPPGRPGLPGADGLAGP
PGTMLMLPFRFGGDGEKGPTISAQEAQAQAILQQARIAMRGPPGPMGLTGRPGPVGGPGA
AGAKGESGEPGPQGPRGVQGAPGPSGKAGKRGRPGADGARGMPGEPGAKGDRGFDGLPGL
PGDKGNRGDRGPQGPPGLPGEDGSRGEDGEVGPRGLPGEAGPRGLLGPRGTPGPPGQPGI
AGVDGPSGPKGNMGPQGEPGPPGQQGIPGPQGLPGPQGPIGPPGEKGPQGKPGLPGLPGS
DGPPGHPGKEGQSGDKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGF
KGDMGLKGDRGEIGQPGPRGEDGPEGPKGRAGPSGDPGAAGPAGEKGKLGVPGLPGYPGR
QGPKGSTGFPGFPGANGEKGARGLHGKPGPRGQRGPTGPRGSRGPRGPTGKPGPKGTAGN
DGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGV
VGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGIPGKDGPAGLRGF
PGERGLPGAQGPAGLKGGEGPQGPPGPVGSPGERGAAGTAGPIGLPGRPGPQGPPGPAGE
KGAPGEKGPQGPAGRDGVQGPVGLPGPAGPSGSPGEDGDKGEIGEPGQKGSKGDKGENGP
PGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGPRGFPGPPGPIGLQGLPGPPGE
KGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKGEPGEAGNPGPPGE
SGTSGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQ
DGIGGEKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGATGAEGRQGEKGAKGEPGAEGA
PGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAPGQDGPPGPLGPPGLPGLKGDPGS
KGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGAKGDAGISGPAGPLGPPGPPGLPGP
QGPKGSKGSSGPAGQKGDSGLPGPPGPPGPPGEVIQPLPIQSPKKTRRSPDYMLSDAGDN
ILDYSDGMEEIFGSLNSLKQDIEHMKYPMGTQNNPARTCKDLQLCHPDFPDGEYWIDPNQ
GCSGDSFKVYCNFTAGGETCIYPDKKSEGVRISSWPKENPGSWFSEFKRGKLLSYLDVEG
NSINMVQMTFLKLLSASARQNFTYNCHQSVAWHDASSDSYDKALRFLGSNDEEMSYDNNP
YIKALHDGCASRKGYAKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCFLG
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcagagatggtccacaaggtggaaaacgagaaggtggccctgggactcggct
gtaaccatgctcatcaccttcgctatccttctccgggctgcagaggtcagaggagctgaa
cccgttgatgtgctaaaagcattagaatttcacaattcaccagaaggagtatcaagaaca
gcaggattttgcacaaacaggagggattcaaaaggatcggatgttgcctacagagtttca
aaaactgcacagctgagtgccccaacaaagcagctgtacccaggtggagattttccagaa
gatttttcaatattaatgacagtaaagcctaaaaagggtatccagtccttccttctgtct
atctacaacgagcaaggaattcagcaagtaggtgttgaagttggtagatcccctgtcttc
ctgtttgaagaccaaaatggaaaacctgccccagaagactatcctcttttcagaacagtc
aacattgctgatggcaagtggcatcgagtagctattagtgtggagaaaaaaagtgttaca
atgattgttgactgtaacaaaaaaactacaaaaccacttgaaagaagtgacaaaacagtt
gtggacaccaatggcatcactgtctttggaaccaggattctggatgaagaagtttttgag
ggtgacatccagcagctgttgattatagctgaccccagagctgcatatgactattgtgag
cattatagcccagactgtgattccccagtgcccaatgctgctcaggctcaagatcctcaa
gttgatgagtacacaccagaagattttatcgaatatgactatgagtatggggatgcagat
tataaagaaactgattctgtaacagagggacccccactgttcgaagagacaatagcacaa
acagagaaaaagaaaggcatggtcaaaaagaggaagaggacagtggccgctagctcaaag
gacaaaccccaaaaggccataacaaaaaaatatgaaaaatatgcatcgaagaagaagaaa
agttatcaagcagcaacaaaaggcaaactaggggtaaaggtaaacattgttgacggtttt
caagagtatagcatagctgaaaatgactatgggccccagacggaagctccctccagaact
actgaagcaaatgagcaaaatcctgctgaagaagtatttgctgaagaatacataactgga
gaggattatgataaaaaaactgaggaaactgaatatggaagcagaggagtagacctcagt
gaatctgatctgctggtagatggagatttaggcgaatatgatttttatgaatataaagaa
tatgaagagaagccaactgattccactaatgaggagtttggtccaggtgttcctgcagag
accgatatcactgaaacgagcgtgactggacatggggcttatggagaaaaaggccaaaag
ggagaaccagctgtaattgaacctggtatgctcattgaaggaccaccgggaccaagagga
cccgctggccttacaggtcccccaggtctacaaggtcctgttggtcctccaggtgaccct
ggtgaaaggggtccaccgggtcgccctggtctccctggtgctgatggtttagcaggtccc
ccaggtaccatgttaatgttgccgttccgctttggtggagatggtgagaagggcccaaca
atctcagcccaggaagctcaagcacaagctattcttcagcaagctaggattgcgatgaga
ggtccacctggtcccatgggactcactggaagaccaggtcctgtgggtggacctggagca
gcaggtgctaagggtgaaagtggtgaaccaggtccccagggtcctcgtggtgttcaaggt
gcacctggtccaagtggaaaagctggcaaaaggggacgtcctggagccgatggtgccaga
ggaatgccaggagaacctggagcaaagggtgacagaggatttgatggtcttcctggactc
cctggtgacaaaggtaacaggggagaccgtggcccacagggacctcctggcttacctggt
gaagatggatcaagaggagaagatggggaagttggaccaagaggtctcccaggtgaagct
ggtccacggggattactgggccccagaggtacacctggtccccctggacaacctggcatt
gcaggtgttgatggaccttcaggcccaaaaggaaacatgggtcctcaaggggaaccagga
cctcctggtcagcaaggaattccaggcccacaagggcttcctggtccgcaaggtcctatt
ggacctcctggtgaaaaaggacctcaaggcaagcctggccttcccggccttcctggttct
gatgggcctcctggtcatcctggcaaagagggtcagtctggagataaaggtgcattgggg
cctccaggtcctcagggtccaattggctatccaggtcctcgtggtgtaaagggagctgat
ggtgtccgtggtctcaagggatccaaaggtgaaaagggtgaagacggttttccaggattt
aaaggtgacatgggccttaaaggtgaccggggagaaattggtcagccaggtccacgagga
gaagacggtccagaaggtccaaaaggtcgagcaggtccatctggggacccgggtgctgct
ggtccagctggggaaaagggtaagcttggtgtacctggattgccaggatatccaggaaga
caaggcccaaagggatcaactggtttcccaggatttccaggtgccaatggagagaaaggt
gcaaggggattacatggcaaaccaggccccagaggacagcgaggaccaacaggtccaaga
ggctcaagaggtcccagaggtcccactggcaaaccaggtccaaagggtactgcaggcaat
gatggtcctcctggcccaccgggtgaaaggggaccacaagggcctcagggacctgtcgga
ttccccggaccaaagggacctccagggccacctggaaaagatggcttgcctgggcaccca
ggacagcggggtgagactggttttcaaggaaaaactggtccccctggtcctggtggtgtt
gttggccctcagggtcctactggtgagacaggcccaattggtgaaagaggtcatccaggt
cctcctggtccaccaggtgaacaaggcctcccaggtgctgcaggaaaagaaggtgctaag
ggtgacccaggccctcaaggcattcctgggaaagatggaccagcaggtcttcgtggtttc
cctggagagagaggccttccaggtgctcagggtccagctggtctgaaaggaggggaaggc
ccacaaggcccacctggcccagttggttcaccaggggaacgtggagcagcaggcactgct
ggcccaattggtctaccaggtcgtcctggacctcagggtcctccaggccccgcaggggag
aagggtgctcctggtgaaaaaggtcctcaaggtccagctggacgtgatggagtacagggt
cctgtaggacttcctggtcctgctggtcctagtggttctcccggagaagatggtgacaag
ggtgaaattggtgaaccgggtcagaaaggtagtaaaggcgacaagggagaaaacggtcct
ccgggtccaccaggtctccagggtcctgttggtgcccctggtatagctggaggtgatggg
gagccaggcccaagaggtcagcaagggatgtttgggcaaaaaggtgatgaaggtcctcga
ggcttccctggccctccaggccctattggcttacagggtctgcctggcccaccaggtgaa
aagggtgaaaatggtgatgtggggccaatgggtccacctggccctccaggtccaagaggt
ccgcagggtcctaatggagctgatggtcctcaaggccccccaggctcaatcggctctgtt
ggaggtgttggtgaaaagggtgaacctggagaagctggtaaccctggacctcctggagaa
tctggaacatctggtccaaaaggtgaaaggggagaaaaaggtgaggctggtccacctgga
gcagctggaccaccaggtgctaaaggacctccaggtgatgatgggcctaagggtaaccca
ggcccagttggttttcctggagatcctggtccccctggggaacctggtccagctggtcaa
gatggcattggtggagaaaagggtgaagatggtgatcctggtcaacctggtccaccaggt
ccttcaggtgaagctggcccacctggtccacctggaaaaagaggacctcctggagcaact
ggtgctgaaggcagacaaggtgaaaaaggtgcaaagggtgaacctggtgcagaaggggct
cctggaaaaacgggtccagttggtccacagggacctgcaggaaaacctggcccagagggt
ctccggggcattcctggccctgtgggagaacaaggtcttcctggagcaccaggtcaggat
ggccctcctgggcctctgggtccacctggcttgcctggcctgaaaggagatccaggttcc
aaaggagagaagggacatcctggtttgattggcctgattggacctccaggagaacagggt
gaaaagggtgataggggtcttcctggcccacagggatctcctggagccaagggtgatgca
ggaatttctggtcctgctggtccacttggaccccctggtcctcctggtctacctggtccc
caaggtccaaaaggttccaaaggatccagcggtcctgctggtcaaaagggtgacagtgga
ttacctggtccacctggtcctccaggtcctccaggtgaggtaatccagccgctgccaatc
cagtcacccaaaaagacaagaagatctcctgattacatgttatctgatgctggtgataat
attctggattattctgatggcatggaagagatctttgggtcattgaattcactgaagcaa
gacattgagcatatgaagtatccaatgggcactcagaataacccagcccgaacttgcaaa
gacttgcaactctgccatccagacttcccagatggggaatattggattgatcctaaccag
ggctgttctggagactccttcaaagtatactgcaatttcacagcaggtggggaaacttgc
atctacccagataagaaatctgaaggagttagaatttcatcatggccaaaggagaatcca
ggatcttggtttagtgaatttaagcgaggcaaacttctttcgtatttggatgttgaaggc
aattccattaatatggtccaaatgacattccttaaactactgagtgcctctgccagacaa
aatttcacttacaactgtcatcagtctgtagcctggcatgatgcatcatctgacagctat
gacaaagcgctaaggttcttaggatcaaatgatgaagaaatgtcttatgacaacaatcct
tacatcaaagctcttcatgatggctgtgcatcaagaaagggctatgcaaagacagtgatc
gaaatcaacacacccaaaatagaccaagtgcctatagttgatgtgatgatcaatgacttt
ggtgatcagaaccagaagtttggatttgaggtcggtcctgtctgcttccttggttaa
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integrated database retrieval system
