Aquila chrysaetos chrysaetos (golden eagle): 115350595
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Entry
115350595 CDS
T08023
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115350595 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achc03400
]
115350595 (LIG4)
Enzymes [BR:
achc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
115350595 (LIG4)
DNA repair and recombination proteins [BR:
achc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
115350595 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
SKA1
Tox-REase-9
Motif
Other DBs
NCBI-GeneID:
115350595
NCBI-ProteinID:
XP_029892230
Ensembl:
ENSACCG00020007350
LinkDB
All DBs
Position
14:66654..70713
Genome browser
AA seq
911 aa
AA seq
DB search
MASAHASQPSKKTVAAHVPFADLCNTLERMQTCKPRPEKTKYFKDFLDSWRKFHGALHQK
EKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTPA
GSRGDTGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTILSIFHPDALELHNVTTDLEKVCRQLHDPNVSLS
DVSITLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTVVTGRIHVVQKKSARTRKEVID
ALNEAIDKREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAIAETPPPNEKPTIFRSFCRVGSGYTMKELYDLGLKLAKHWKPYHRKDPPS
NILCGTEKPEMYIEPCNSVIVQIKAAEIVNSDVYKTDCTLRFPRIEKIREDKEWYECMTS
DTLEDLRSKAEGKLASKHLHMDEYDEPQEKKRKTVSKVKKVIGIAEQFKAPDLSGVNKVS
NVFEDVEFCVMTGTGKYSKSELESRIAEWGGSVVQNPGPETYCVIVGAENVRVKNIIASN
KYDVVRAEWLLQCFQTKKLVPWQPAFMIHMSPDTKEHFACEYDCYGDSYTADTDVAQLKE
VFSRMKDSKVMPLDVIAELEEHYSWNSCQLSIFRGNTIYVDCYAVVNEPRTKIHGTTLSV
RALELRFYGAKVVSHLEEGVSHVVIGEDHSRVKEMKALRRTFGKKFKIVSELWVTQSVEG
GVLKNENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcgcacgcttcgcagccttcaaagaaaacggtggccgctcacgtgcctttt
gcggatctgtgtaatactctggagcgaatgcagacgtgtaaacctcgtccggagaaaacc
aagtatttcaaggattttctggactcctggagaaaattccacggtgctcttcatcaaaag
gaaaaggacgtcacagattctttttatccagctatgcgacttattcttccgcagttggaa
agagaaaggatggcatacggaattaaagaaaccatgcttgcgaagctgtatattgaactg
cttaatttaccaaaagatggaaaagatgctgcaaagctgttaaactatagaacacctgct
ggctcacgtggagataccggggattttgcaatgatcgcgtactttgtgttaaaacctagg
agcccgaaacaaggcagactgacaatagaacaagtcaatgaacacttggatgcgatagct
aataataatgctgctaaaaacaagggtctgttaaagaaaagtcttcttcagttaattacc
cagagcacagcactggaacagaaatggctcatccgcatgattataaaggatctgaagctt
ggtgttagtcagcaaactatactttccatttttcatcctgatgctcttgaattacacaac
gtcacaactgatttggaaaaagtttgcagacaactgcacgatcccaatgtctcacttagt
gatgtttctatcacgttgttttctgcctttaaaccaatgcttgctgctattgctgatgtc
cagcaaatcgagaaacaaatgaataaccagatattctacatagaaactaagctggatggt
gagcgtatgcagatgcacaaagatggagatgtgtataaatatttctcccgaaatgggttt
gactatactcagcagtttggcgcttccccccttgatggttcgttaacgccatttattcat
aacgtatttaagagcaacatacaaaattgcattctggatggtgaaatgatggcttacaat
cctgagacgcaaacctttatgcaaaaaggaaacagattcgacataaaaagaatggtggag
gactctgatctgcagacctgcttctgtgtgtttgatgtattgatggttaatgatcagaag
ttggggcacgaagtactaagcaaaagatatgaaatcttaagtagcgtatttactgtggta
acgggcaggatacatgttgtacagaaaaaaagtgccagaacaagaaaagaagtaattgat
gctttaaatgaagcaatagataaaagagaggaagggattatggtgaaagatcccatgtct
acctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccggaatatgtcaat
ggactgatggatgaactagaccttttaattgttggtggttattgggggaagggctcacgt
ggtggaatgatgtctcattttctgtgcgctattgcagagacgccccctccaaacgaaaaa
cctaccattttccgctctttttgtcgtgttggctctggctatactatgaaggaattgtat
gatttaggtttgaaactggctaaacactggaagccctaccataggaaggaccctccctct
aacatcttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtcatc
gttcagatcaaggcagctgagattgttaacagtgatgtatacaaaactgactgtactttg
agattcccccgaattgagaagataagagaggacaaagaatggtacgagtgcatgacttca
gacacgttggaagatctcagaagcaaagcagaagggaagctggcatctaagcaccttcat
atggatgagtatgatgagccacaagagaaaaaaaggaaaactgtgtcaaaggtgaagaag
gtgattggaatagctgaacagtttaaagctcctgatctttctggtgtaaacaaggtttca
aatgtatttgaagatgttgagttttgtgttatgacgggaacgggaaagtactcaaagtct
gaactggaaagcagaatagccgaatggggtggcagcgtggtacagaatccggggccagag
acttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcattgcttccaac
aaatacgatgtggtgagggcggagtggctccttcagtgttttcaaaccaaaaagctggtg
ccttggcaaccggcctttatgattcacatgtctcctgacacaaaagaacattttgcttgt
gagtatgattgttatggagacagctacacagcagacacagatgttgcacaactcaaggaa
gtgttctcaagaatgaaagacagtaaggtgatgcctttggacgtgattgcagagttagaa
gagcattattcgtggaacagctgtcagctcagtatattcagaggaaacactatttatgtg
gactgttatgctgttgttaatgagcctagaaccaaaatccatggaacaacactatcagtt
agggctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggtgtc
tcccatgttgttataggagaagatcattcccgggtaaaagagatgaaagcactcagaaga
acatttgggaaaaaatttaaaattgtatctgagctgtgggtaacacagtcagtggaggga
ggagtcctgaagaatgaaaatcagtacttaatttaa
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