Aspergillus chevalieri: ACHE_41212S
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Entry
ACHE_41212S CDS
T08080
Symbol
LIG4
Name
(RefSeq) DNA ligase (ATP)
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ache
Aspergillus chevalieri
Pathway
ache03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ache00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ACHE_41212S (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ache03400
]
ACHE_41212S (LIG4)
Enzymes [BR:
ache01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
ACHE_41212S (LIG4)
DNA repair and recombination proteins [BR:
ache03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
ACHE_41212S (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_A_C
RNA_ligase
LIG3_BRCT
DNA_ligase_IV
CDI
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
66983006
NCBI-ProteinID:
XP_043137170
LinkDB
All DBs
Position
4:join(3396430..3396491,3396546..3398656,3398704..3398835,3398892..3399024,3399079..3399617,3399681..3399700)
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AA seq
998 aa
AA seq
DB search
MVSDEVMGPAAEELDEDLDEKFPNRPHNHSPTLPFHELFLTLFNPLSEIKKRPAGQGPAR
RKVGPSGKSAANLNPIERRRDIIERFISRWRREVGDDIYPAFRLILPDRDRDRAMYGMKE
KVIGKMLVKIMKIDKNSEDGFNLLNWKLPGQTAATRMAGDFAGRCYDVISKRPMRTELGN
MLIEEVNEKLDQLSVASKEENQLPILAEFYRRMSPEELLWLIRIILRQMKVGATERTFFD
VWHSDAENLYSISSSLRRVCWELHDPNLRLEAEDRGITLMQCFQPQLAQFQMHSLEKMIS
RMKPTDDDPVFWIEEKLDGERMQLHMAPDSSLPGGRRFGFWSRKAKDYTYLYGNGIHDEN
GALTRHLGDAFVDGVQSVILDGEMVTWDPEQDAPVPFGTLKTAAIAEQRNPFSTGPRPLF
RVFDLLYLNGRDVTKYTLRDRRNALQKAVKSVNRRLEIHPYQEATTTAEIETALRTVVAE
ASEGLVLKSPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVVGAYYGSGRRGGSLSSFL
CGLRVDGAQSSQSTNPMKCYSFCKVGGGFNAQDYANIRHHTDGKWMDWDPKKPPMTYIEL
AGGDAQYERPDVWIKPDDSVVLCVKAASVSVSDQFRMGLTLRFPRFKRLRSDKDWKTALS
VQEFLDLKSNVEQEHKEKEFSVDNSRKKRVKRTTKRPLEIAGYNADKEVGYVGPSGRIFE
GLNFYILTDSSVPEKKSKAELEHLVKANGGKFFQTSTAAPNTICVADRRTVKVASLQKSG
EIDIIRPSWLMDCVKQNTVDVGLPDLLLPLEARHMFFMTANKQEEVESNLDQFNDSYARD
MTANELKDILEQMSKKYNFDSSQCPDTITKITERIQERASTGYETPIGWLFKGLTFYFNH
PQTEETKETDQAQSLRTVAMANIARFAGADIASDTGDKSITHVIMDPDTPAAEISAFRGS
LAARGAGRKVPHIVTNKWIEESWDAKTLLDEERFQPAR
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggtttcagacgaggttatggggcctgcggctgaggagctggatgaagaccttgacgag
aaattcccaaaccgcccacacaatcattctcctacactcccattccacgaactctttctc
accctcttcaacccgcttagcgaaatcaagaagagacccgcaggccaaggtcccgcacgc
cggaaagtcggtcctagtggaaagtccgccgcgaacctcaaccccatcgaaaggcgacgt
gatatcatagagcgattcatatcccggtggaggagggaggtgggtgatgatatctacccg
gcttttaggctgattcttccggacagggaccgggatcgcgcgatgtacggtatgaaagag
aaggtgatcgggaagatgctcgtgaaaatcatgaagatcgataagaattccgaggacggg
tttaacctgctcaattggaagctaccgggacaaacagcggcgactcggatggctggcgat
ttcgccggtcgatgctacgacgtgatttcgaaacggccgatgcggacggaactcgggaac
atgttaatcgaagaggtgaatgaaaaactcgaccagttgtccgtagcttcgaaggaagaa
aaccagttacccatcttggccgaattctatcgtcggatgagtcccgaggagcttctgtgg
ttgatccggattatcttgcgacagatgaaggttggagccacggagcggacattttttgac
gtgtggcattcggacgcagaaaatttgtatagtatctctagcagcttacggcgcgtctgc
tgggagctccacgaccctaatcttcgactggaggcagaagaccgggggataacactgatg
caatgtttccaaccccaactggcacagtttcaaatgcattcgctggagaagatgattagc
cgaatgaagccaacagatgacgatccggttttttggattgaagagaagctcgatggagag
cgtatgcagctccatatggcacctgatagttcgttacctggaggccggaggtttggcttc
tggtcgaggaaggccaaggactacacgtatctctacgggaacgggatacacgacgagaat
ggcgcactgaccagacatcttggggatgcgtttgtggacggtgtacagagcgtaattctg
gatggtgagatggtcacatgggatcccgagcaggatgcgcctgttccgttcggtacattg
aagacagctgcaattgctgagcagcggaatcccttttcgacgggaccacgtcctcttttt
cgtgtttttgatctattgtatctgaatgggcgcgacgtgacgaagtatactctacgtgac
cgtcggaatgccttgcagaaggctgtgaaatcagttaaccgaagacttgagatacatccg
tatcaagaggccaccactaccgcagagattgagaccgcccttagaacagttgtcgcggaa
gcctctgaagggttggtgttgaaaagccctagatcgccttaccggttgaacgagcgacac
gacgactggatgaaggtaaagccagagtacatgactgaatttggggaatctttggatctc
attgtggttggcgcgtattacggcagcggtcgtcggggtggttctctttccagcttcttg
tgcggactgcgcgtcgacggcgcccagagctcacaaagtaccaatcccatgaaatgctac
tccttctgcaaggtcggtggaggcttcaacgcgcaagactacgcgaatatccgccatcac
acagacggcaaatggatggattgggatccaaagaagccaccgatgacatacatcgagctg
gctggtggggatgcacagtacgaacgaccagacgtatggattaagccagatgactcggtt
gttctgtgtgtcaaggcggcgtcggtttctgttagcgaccagttccgaatgggactgact
ctgcggttcccgcggtttaagagattacgcagtgacaaggactggaagactgctctttct
gtgcaagaattcctcgatctcaaatcgaatgtggaacaggagcataaagagaaggagttc
agtgttgataacagtcgtaagaagcgggttaagagaacgacaaagaggcctcttgaaatc
gcaggatacaatgcagacaaggaggttggatatgttggaccgtctggtcgtattttcgag
gggttgaacttttacatcttgacggattcaagcgtaccagagaagaagtcgaaagctgag
ctggaacaccttgtcaaagccaacgggggtaaattctttcagacgagcactgctgcaccg
aataccatttgcgtcgcggatagaagaacggtgaaagttgcatccctgcaaaagagtggt
gaaatagatataatccgaccttcatggctcatggactgtgtcaagcaaaacacagtcgat
gtaggtcttccagacttactactgccccttgaagcaagacacatgtttttcatgacagcc
aacaagcaagaagaagtcgaatcgaacctcgaccagttcaacgatagctatgcccgggac
atgacagccaacgaactcaaggacatcctcgaacagatgagcaaaaagtacaattttgac
agctcgcagtgccccgatacaatcaccaaaatcaccgaacgtatccaagaacgtgcatcc
accggttatgaaaccccaattggctggctgtttaaaggtctcactttttactttaaccat
ccccaaactgaggaaacaaaggagacagaccaagcacaaagcctccgcacagtcgcaatg
gctaatatcgcccgattcgccggcgcggatattgcctctgacacaggagacaagtccata
acgcacgtaattatggaccctgacacgccggctgcggagatatccgcgtttcggggatcg
ttggcggcccgaggcgctgggaggaaagtgccgcatatcgtcacgaataagtggattgag
gagagctgggatgcgaagacgttgttggacgaggagaggtttcaacctgctaggtga
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