Acanthisitta chloris (rifleman): 103808421
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Entry
103808421 CDS
T08456
Name
(RefSeq) vacuolar protein sorting-associated protein 13D-like
Organism
achl
Acanthisitta chloris (rifleman)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_DH-like
Motif
Other DBs
NCBI-GeneID:
103808421
NCBI-ProteinID:
XP_009079450
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All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
EMKTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEENGTLLDDAHN
VSEWQEVITGEEMPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEEVSPVSVDKVGTFFRY
AAPDKNSSSSTFSSLPPVRVVFEVTMEGSARKVITVRSALIVKNKLETPMELRLDSPSAP
DKPVVLPAVMPGDSFAIPLHLTSWRLQARPKGMGVFFCKAPIHWTNVQKTAEVCSSKREC
HSMESENSRFFRFCVAIKKENYPDYMPSSIFSDSAKQIFRQPGHTIYLLPTVVICNLLPC
ELEFYVKGLPISGTLKPGKEAALHTADTSQNIELGVLLENFPVCKELLIPPGTQNYMVRM
RLYDVNKRLLNLTIRIVCRAEGSLKILISAPYWLINKTGLPLIFRQDNAKTDAAGQFEEH
ELARSLSPLLFCYADKEQPNFCTMRVGRGIHPEGMPGWCQGFSLDGGSGVRALKVIQHGN
RPGLIYNIGIDVKKGRGRYIDTCMVTFAPRYLLDNKSSYKLAFVQREFARGRGASNPDGY
ISTLPGSSVGFHWPRNDYDQLLCVRLMDVPNCIWSGGFEVNKNNSFHINMRDTLGKCYFL
RVEITLQGATYRIAFSDTDQLPPPFRIDNFSKVPIVFNQHGVVEPRLYTEVKPLTSLDYA
WDEPVLPPFIMLTVKGAGSSEVVCSMNDFQDSKQLYYENFIYIAATYTFSGSQESSVRPV
ASNKDVANAELVLDVSSKTQRVMLKKKEPGKRSQLWRMTDTGMLCHEGSSVPHNPHKPSP
RSGDSCMILDIAGLAAVTDNRYEPLMLRKPDRRRSTTQTWSFRDGKLTCGIHGLVVQAKG
GVAGLHDGAEVVLGPDTSLELLGPVPPEQQFTNQKMRPGSGVLAVRVIPDGPTRVLQITD
FNQRRNDRLSSEGDELAVTEQDLRKLKNPETEQELEVLVKLEGGIGLSLVNKVPEELVFA
SLTRINVHYTQLATSQVLELSVQDIQVDNQLIGTTRPFMLFLTPRISENEPVETGPAVQV
NAMKFPSKNALTDIYKHLMITARKFTVQIEEKLLLKLLSFFGYDQSESEVEKYDENLHDK
AVEQGGGQKRYYFENLKISVPQIKLSVLTSNKLPLDLKALKSTLGFPLIRFEDAVINLDP
FTRVHPYETQEFIINDILKHFQEELLSQAARILGSVDFLGNPMGLLNDVSEGFSGLIKYG
NVGGLIRNVTHGVSNSAAKFAGTLSDGLGKTMDNRHQTEREYIRYHAATSGEHLVAGIHG
LAHGIIGGLTSVITSTVEGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVR
DTATLSGPRTQAERVRKPRCCRGPQGLLPRYLESQAEGQEQLFKLTDNIQDEFFIAVENI
DSYCVLISSKAVYFLKSGDYTDREAIFLEVKYDDLYHCLVSKDHGNVYIQLTKKAVNTSS
GVAMPGPSQQRPMVKVKSEALAVKLSQEINYAKSLYYEQQLMLRLNENQEQLELDS
NT seq
4493 nt
NT seq
+upstream
nt +downstream
nt
ctgaaatgaagactccaaagcgtaggcagccctttgtaccctttgccctgaggaatcaca
ctggctgcaccctgtggtttgccaccctgaccacaaccccgacccgggctgcactgtctc
acagtgggagtccaggtgtggttcctgaggaaaacgggacattgctggatgatgcccata
atgtcagtgaatggcaagaagttatcactggggaggaaatgccatttgagtttgaagcca
gaggaaaactcagacacaggcacacacatgatctacgaattcatcagctgcaagtgagag
tgaatggctgggaagaagttagtccagtgtctgtggacaaagttggaacctttttccgat
atgctgccccggataagaactcctcctcatctactttttcttcattgcctccagttcgtg
tggtgtttgaagtcaccatggagggcagtgcccggaaggtgatcacagtgcgctcggcct
tgatcgtgaagaacaagctggaaacaccaatggagctcaggctggacagtccttctgccc
ctgacaaacctgtagttcttccagcagttatgccaggagattcctttgctattccattgc
acctcacatcttggcgattgcaagccaggcctaaaggaatgggagtgtttttctgcaagg
ctccaattcactggactaatgttcagaagacagcagaggtgtgtagcagcaagagggagt
gtcactccatggagtctgaaaacagcagatttttcaggttctgtgtggccataaagaaag
agaactaccctgattacatgccttccagcatattctcggacagtgccaagcagattttca
gacagcctgggcatactatttacctcttgccaacagtggtaatctgcaacctgctccctt
gtgagcttgagttctatgtgaagggtttgcccatcagtgggacactgaagcctggcaaag
aggcagctctgcacacagctgatacatctcagaacattgagctgggggtgttgctagaaa
acttcccagtgtgcaaagagctgttgattccccctgggacacagaactacatggtgcgga
tgcgactgtatgatgtcaacaaacgactgctaaacctgaccatcaggatcgtgtgtcgtg
ctgaaggctctctgaaaatactcatctctgctccatattggttaatcaacaaaacaggtt
taccattgatcttcaggcaagataatgcaaaaacagatgctgctggtcagtttgaagagc
atgagcttgctaggagcctcagcccactgctattctgttatgctgataaagaacagccaa
acttctgtacaatgcgggttggaagagggatccatcctgaaggaatgcctggctggtgcc
agggcttctccctggatggtggcagtggtgtcagagcccttaaggtgatccagcatggaa
acaggccaggcctcatctataacattggtattgatgtgaagaaaggcagagggcgataca
ttgacacctgcatggtcacctttgctcctcggtacctgctggacaacaagtcaagctaca
aattggcctttgttcagagggaattcgccagaggtcggggagcatccaatcctgatggct
atatctccaccctgcctggctccagcgtcgggttccactggccacggaacgattatgatc
agctgttgtgtgtgaggctgatggatgtcccaaactgcatctggtctgggggctttgagg
tcaacaaaaataactcattccacattaatatgagggacaccctgggaaaatgttacttct
taagagtagaaattaccctccaaggagccacttaccgcattgccttcagcgacaccgacc
agctgccgccgcctttccgcatcgacaacttctccaaggtcccaattgtgtttaaccagc
acggggttgtggagcccaggctgtacactgaggtgaagcccctgacctctctggattatg
catgggatgaacctgttctgccacctttcatcatgctgacagtgaaaggcgcaggctcct
cagaagttgtctgcagcatgaatgatttccaagacagcaaacagctttactatgaaaact
tcatctatattgctgctacttacactttctcaggttcacaggagtcaagtgtgagaccag
ttgcttcaaataaggatgttgcaaatgcagaacttgtccttgatgtttcttcaaagactc
agagagttatgctgaaaaagaaggagccaggaaagcgatcccagctctggagaatgacag
acacaggaatgctttgccatgaagggtcttcagttcctcacaaccctcataaaccttctc
ctcgctctggggactcctgtatgattttggacatcgcaggcctggcagctgtcacagaca
acaggtatgagcccttgatgctgaggaaacctgatcggcggcgcagcaccacccagacat
ggagcttccgggatggaaagctgacctgtggcattcatgggcttgttgtccaggcaaagg
gaggagtagctggtcttcatgatggagcagaagttgttctaggtcctgatacttcacttg
aacttttggggccagttccacctgaacagcagttcacaaaccaaaagatgaggcctggct
caggagtactggctgtgagagtcatcccagatgggccaactagggttctgcagataactg
attttaaccagcgcagaaatgatcgtttgtccagtgaaggagatgaacttgcagttacag
aacaagatctgcgcaagctaaaaaatccagagacagagcaagaactggaagtgcttgtga
aactggaaggtggaataggattgtctttggtcaacaaagtccctgaagagcttgtgtttg
caagcctcacaaggattaatgtccactacacacagctggcaacaagtcaggtgctagagc
tcagtgtgcaagacatacaggtggacaaccaactcattggcaccacacgaccttttatgc
tcttcctgacacccaggatcagtgagaatgagcccgtggagactggccctgctgtgcaag
tcaatgccatgaaatttcccagtaaaaatgcactgactgatatatacaagcatctgatga
tcactgcccgaaagttcacagttcaaattgaggagaaactactgctgaagctcttgagtt
tctttggctatgaccaatctgaatcagaggtggagaagtatgatgaaaacctccacgaca
aggctgtggaacaaggtggaggacagaagagatactactttgaaaatctgaaaatcagtg
tgcctcaaatcaagctgagtgtcctcacttccaacaagctccctttggatctcaaggcat
tgaagagcacattggggttccctctgatccggtttgaggacgctgtgattaacctggatc
ctttcactcgggtccatccgtatgaaactcaggaattcatcattaatgacattctgaaac
acttccaggaggagctgcttagccaggcagcaaggattctgggttctgtggatttccttg
gcaaccccatgggtctattgaatgatgtttcagaaggtttttctggacttataaagtatg
gcaacgtgggtggcctcatcaggaacgtcacacatggagtgtccaactctgctgcaaagt
ttgctgggaccttgtcggatgggttgggaaagaccatggacaacagacatcagacggaac
gggaatacatccgataccacgcggcaaccagtggagagcatcttgtggctggaatccatg
gactcgctcatggtatcattggaggattgacaagtgtcataacctcaacagtggaaggtg
tgaaaacagaaggaggagtcagtggtttcatatctggcctggggaaggggctggtgggca
cagtcaccaaacctgtggcaggagcactggattttgcgtcggaaacggcacaggcagtga
gggacaccgcgaccctgagcggccccaggacccaggcggagcgggtgcggaagccacggt
gctgcaggggcccccaggggctcctgcctcgctacctggagagccaagcagagggtcagg
agcagctgttcaagctgacagacaacatccaggatgaattcttcatagcagtggagaaca
ttgacagctactgtgttctcatctcctccaaagctgtgtacttcctgaagagtggggact
acacagaccgtgaggctattttcctcgaggtcaagtatgatgatctctaccactgcctcg
tctccaaggaccatggcaatgtctacatccagctgaccaagaaggcagtgaacacgagca
gtggggtagccatgccaggcccctcccagcagagacccatggtgaaagtgaaatcggaag
ctctggcagtaaagctgtctcaagaaatcaactatgcaaagagcctttattatgagcagc
agctgatgctgagactcaatgaaaaccaagaacaactcgagctggactcttga
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