KEGG   Acidianus sp. HS-5: HS5_19870
Entry
HS5_19870         CDS       T07980                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
acih  Acidianus sp. HS-5
Pathway
acih03030  DNA replication
acih03410  Base excision repair
acih03420  Nucleotide excision repair
acih03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HS5_19870
   03410 Base excision repair
    HS5_19870
   03420 Nucleotide excision repair
    HS5_19870
   03430 Mismatch repair
    HS5_19870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acih03032]
    HS5_19870
   03400 DNA repair and recombination proteins [BR:acih03400]
    HS5_19870
Enzymes [BR:acih01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HS5_19870
    6.5.1.6  DNA ligase (ATP or NAD+)
     HS5_19870
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     HS5_19870
DNA replication proteins [BR:acih03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HS5_19870
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HS5_19870
DNA repair and recombination proteins [BR:acih03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HS5_19870
   NER (nucleotide excision repair)
    Other NER factors
     HS5_19870
   MMR (mismatch excision repair)
    Other MMR factors
     HS5_19870
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: BDC19097
LinkDB
Position
complement(1849179..1850981)
AA seq 600 aa
MEFKIIADYFDRLEKISSRLQLTSLLADLFKNTDKNVVDKVVYLIQGKLWPDFLGMPELG
IGEKFLVRALSIATGVKDDDIEKMYKSVGDLGQVSFDIKQKQQSANILAFLGAQKSSTPL
TVEKVYDDLTKVATSTGEGSRDIKIRLLAGLLKDASPLEAKYLVRFVDGRLRVGIGDATI
LDALAITFGGGQNFRPIVERAYNLRADLGNIAKLLATGGIEQVKNIKPQPGIPIRPMLAE
RLSDPVEMLNKVGNMALVDYKYDGERGQIHKTGDKVFIFSRRLENITNQYPDVAEYVLKH
VKGNEFIVEGEIIPVDPETGEMRPFQELMHRKRKSDIHEAIKEYPVNVFLFDLMYYEGED
YTVKPLSERRKKLESIVEDNDYVHIATHIITDNVDKLKEFFYQAISEGAEGVMVKSLAPD
AIYQAGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKGRKGGKYSSFLMAAYNPDKDVF
ETVCKVASGFTDAELDDLQKKIAELKRDAPHPRVVSTMVPDVWLTPSIVAEIIGAEITIS
PLHTCCKDQYAEGGLSIRFPRFIRWRPDKSPEDATTNREILEMYKSQLKKIEEKPSDQNV
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggagtttaaaattatagctgattactttgatagattagaaaagatttcttcaaggctt
caactcacttcactacttgcagatctttttaaaaatacagataaaaatgttgtagataag
gtagtatatttaattcaaggaaagctttggccagattttctaggaatgcccgaattagga
ataggcgagaaatttctcgtacgtgcattatcaatagcaactggtgtaaaagatgatgat
atagagaaaatgtacaagtctgtaggagatttaggtcaagtatctttcgatataaaacaa
aagcaacaatcagcaaatattttagcatttttaggtgcacaaaaatcatcaacgccacta
acagtagaaaaagtttatgatgatttaacgaaagttgcaactagtactggagaaggtagt
agggacataaagattaggcttttagcaggattgcttaaagacgcctctcctctagaagcg
aaatacttagttaggtttgtcgacggaaggttaagagtaggaataggagatgctacaata
ttggacgcattagcaataaccttcggtggagggcagaattttagacctatagtcgaaagg
gcttacaacttaagagccgacctaggtaacattgctaaacttttagcaacaggcggaata
gaacaagtaaagaatattaaacctcagcctggaattcctataaggccaatgctagctgaa
agactctcagatcctgtagagatgctgaataaagtaggtaacatggcattagttgattat
aagtacgatggcgagagagggcaaattcataagacaggagataaggttttcatattttcc
agaaggttagagaacataactaaccaatatcctgacgttgcagaatacgtattaaaacac
gttaaaggtaacgagtttatagttgaaggagaaataatacctgtagatccagagacagga
gaaatgaggccttttcaagaattaatgcatagaaaaagaaagtcagatattcatgaagct
ataaaagaatatccagttaacgtgttcttgttcgatttaatgtattatgagggagaggat
tatacagtaaaacccttatcagaaagacgtaagaagctcgaatctatagttgaagataac
gattacgttcatatagctactcatattataactgataatgtagataaactcaaggaattc
ttctatcaagcaatctcagaaggagcggaaggcgtaatggtgaaatccttagctccagat
gcaatatatcaagctggatcaagaggatggttatggataaagtttaagagagattaccaa
agcgaaatggcagatactgtagatttggtaatggtaggagcttttcacggtaaaggaaga
aaaggcggaaagtatagttctttcttaatggcggcatataatcccgataaggacgttttc
gaaactgtatgtaaagttgcttcaggctttacggatgctgaattagatgatttacagaag
aagatagcagaactgaagagagacgctcctcatcccagagtagtttcaaccatggttcca
gatgtgtggttaactccatcaattgttgctgaaataattggtgcagaaataactatatct
cctttacacacttgttgtaaagatcaatatgctgagggcggactatctataagattccct
agatttataaggtggaggccagataaaagccctgaggatgctactactaatcgtgaaatc
cttgagatgtataagagccaattaaagaagatagaagaaaaaccctcagatcaaaatgta
taa

DBGET integrated database retrieval system