KEGG   Acidiferrobacter sp. SPIII_3: C4901_12190
Entry
C4901_12190       CDS       T05469                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K19641  two-component system, NtrC family, response regulator HupR/HoxA
Organism
acii  Acidiferrobacter sp. SPIII_3
Pathway
acii02020  Two-component system
Brite
KEGG Orthology (KO) [BR:acii00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C4901_12190
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:acii02022]
    C4901_12190
Two-component system [BR:acii02022]
 NtrC family
  HupT-HupR (hydrogenase synthesis regulation)
   C4901_12190
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 AAA AAA_2 nSTAND3 HTH_30
Other DBs
NCBI-ProteinID: AWP23991
UniProt: A0A2Z3R1P5
LinkDB
Position
complement(2438603..2440039)
AA seq 478 aa
MLKSKVLVVDDEIRVLEAVERILSERFIVRLAQTPAEAEGICEGEVVHVILCDQRMPELT
GVAFLRRVRERWPEIVRIILSGYTDPADIIEGINEAGIYQYVMKPWHPDHLLLTVENAAR
LYALQREGEIVTSEMNMAMPAIEHRLKARRARLKSAFRLDSILRAPGSPLEAACELTARV
ADYDVPVVITGESGSGKELFARALHYGSARADKPFVVLNCGALPDTLLESELFGYRRGAF
TGAVSDYVGLFEQADGGTIFLDEIGEISPAFQVKLLRVVQDGEVRPLGSPRRTQVDVRLI
AATNCELEQAVRDGRFREDLYYRLAVIRLRLPPLRERICDLERLCQAALEQATRLYGKVV
TRLHPEVVSCFQAYTWPGNVRELTNEIQRMVVLAEGEVLGPELVSPHIRDVVTGAAPPGG
SRGVLKAHIACVEAGVLRDALARHDGNKSRVAAELGLSRVGLRAKLARYGLAGEKDKM
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgctaaagagcaaggtgctggtcgtggacgacgagatccgagtccttgaggccgtggag
cggatcttaagcgagcgttttatcgtgcgcctggcccagacgccggccgaggccgagggg
atatgcgagggcgaggttgtgcacgtgattctgtgtgaccaacgcatgccggaactgacc
ggagtcgccttcttgcgcagggtgcgtgaacgatggcctgagatcgtgcgcatcatcctg
tcgggttacacagacccggccgatatcatagaaggcatcaatgaggccggcatctaccag
tacgtcatgaagccctggcatcccgaccatctattgcttacggtcgaaaacgccgcgcga
ctgtatgccttgcagcgcgagggggagattgtcacctcggagatgaatatggcgatgccc
gccatcgagcatcgcctgaaggcgcgtcgggcgcgcctcaaaagcgcgtttcgactggat
agtattctgcgtgcccccggcagccccctggaggcggcctgtgagttgacggcacgcgtc
gcggactacgatgtcccggttgtcataaccggcgaatcaggcagcggcaaggagctcttc
gcgcgcgccctccattacggaagcgcgcgggccgataagccgttcgtagtcctaaactgc
ggggcgttacccgacacgctcctggagagcgaacttttcggctatcggcgcggggccttc
accggcgcggtaagcgattatgtcgggcttttcgaacaggccgacgggggcacgatcttt
ttggatgagatcggtgagatctcgccggcctttcaggtcaagcttttgcgcgtggtgcag
gatggcgaggtacggccgctcgggagcccgcggcgtacgcaagtggatgtgcgcctgatt
gccgccaccaactgtgagctggagcaggcggtccgtgatgggcggtttcgcgaggacttg
tattaccgtctggccgtgatccgcctgcggctgccacccttgcgcgagcgaatctgcgac
ctcgaacggctgtgtcaggcggcgttggagcaggcgacccgcctttacggcaaggttgtg
acccggctgcatccggaggtagtcagctgcttccaggcatacacgtggccgggcaatgtc
cgcgagcttacaaacgagatccagcgcatggtggtgctggctgagggcgaagtactgggt
ccggaattggtgtcgccgcacattcgtgacgtggtgacaggcgcggcacctccgggtggt
tcgaggggggttttgaaggcccacattgcctgtgtggaggcgggtgttttgcgggacgca
ttggcccgccatgatgggaacaagagccgcgtggccgccgaattgggactgtcacgcgtg
ggcctgcgtgccaagcttgcccgttacggcttggccggtgaaaaggataagatgtga

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