Acidovorax carolinensis P3: CBP35_04975
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Entry
CBP35_04975 CDS
T04998
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acis
Acidovorax carolinensis P3
Pathway
acis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBP35_04975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acis03019
]
CBP35_04975
03016 Transfer RNA biogenesis [BR:
acis03016
]
CBP35_04975
Enzymes [BR:
acis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CBP35_04975
Messenger RNA biogenesis [BR:
acis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CBP35_04975
Transfer RNA biogenesis [BR:
acis03016
]
Prokaryotic type
tRNA degradation factors
CBP35_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
DUF5813
Phage_tube
S1_2
Motif
Other DBs
NCBI-ProteinID:
ART54552
UniProt:
A0A240UFB2
LinkDB
All DBs
Position
1065167..1067413
Genome browser
AA seq
748 aa
AA seq
DB search
MSIFNKITKTFQWGDKTVIMETGEIARQAGGAVLVNIDDTVVLATVVASKVAKAGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSEHETLTSRLIDRPIRPLFPEGFFNDVHVVIHTV
SLNPEVDADIAALIATSAALAISGIPFNGPIGAARVGYINGEYVLNPGQTARKSSQMDLV
VAGTEAAVLMVESEAQQLSEEIMLGAVVFGHQQGNVAINAIHELVREAGKPLWDWKAPAK
DEPLIAKVTALAEGKLRAAYQIRNKQARTHACREAYAVVMADLKEEGVAFDSVKVEGMLF
DIEARIVRSQILAGEPRIDGRDTRTVRPIEIRSSVLPRAHGSSLFTRGETQALVVTTLGT
ERDAQRIDALAGEYEDRFMMHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALVAVLPTK
EEFPYTMRVVSEITESNGSSSMASVCGGCLSMMDAGVPMKAHVAGIAMGLIKEDNRFAVL
TDILGDEDHLGDMDFKVAGTTAGITALQMDIKIQGITKEIMQVALAQAKEARIHILGKMQ
EAMGEAKTEVSNFAPKLYTMKINPEKIRDVIGKGGAVIRALTEETGCQINIEEDGTITIA
ATDNAKADEAKRRIEQITAEVEIGKIYEGPVTKILDFGALINLLPGKDGLLHISQIAHER
VERVGDYLTEGQIVKVKVMETDEKGRVKLSMKALAERPAGGSDRPAPAERGDRGGERRDG
GRDRQPADQQQQQQQAVPAEGSAGQMNG
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcaacaaaatcaccaagactttccaatggggtgacaagaccgtcatcatg
gaaacgggcgaaatagcccgccaggctggcggcgccgtgttggtgaacatcgacgacacc
gtggtgctggccaccgtggtggcttccaaggtggccaaggcgggtcaagactttttcccg
ctgacggtggattacatcgagaagacctacgctgcgggcaagattcctggcagcttcttc
aagcgcgaagccaagcccagcgagcacgaaaccctgaccagccgcctgatcgaccgcccg
atccgcccgctgttccctgaaggcttcttcaacgacgtgcatgtggtcatccacacggtg
tcgctgaaccctgaagtcgatgccgacattgccgccctgatcgccaccagcgcagcgctg
gccatctcgggcattccgttcaatggtccgattggcgctgcacgcgtgggctacatcaat
ggtgaatacgtgctcaaccccggccagacggcgcgcaagagctcgcagatggacctggtt
gtggctggcaccgaagcggccgtgctgatggtcgaatccgaagcgcagcaactgtccgaa
gaaatcatgctgggtgccgtggtgttcggtcaccagcagggcaatgtggccatcaacgcc
atccacgagctggtgcgcgaagccggcaagcccctgtgggactggaaggcgcccgccaag
gatgagccactcatcgccaaggtgaccgccctggccgaaggcaagctgcgcgctgcctac
cagatccgtaataagcaggcccgcacgcacgcgtgccgcgaggcctatgccgtggtcatg
gccgacctgaaggaagaaggcgtcgcattcgacagcgtcaaggtcgaaggcatgctgttc
gacatcgaggcgcgcattgtgcgcagccagatcctggcgggcgagccacgcatcgacggc
cgcgacacgcgcaccgtgcgccccatcgagatccgcagcagcgtgctgccccgcgcgcac
ggctcgtcgctgttcacgcgtggcgaaacccaggcgctggtcgtgaccacgctgggcacc
gagcgtgatgcgcagcgcatcgacgcactggccggcgagtacgaagaccgtttcatgatg
cactacaacatgcctccctttgccacgggcgaagtgggccgcatgggcagcaccaagcgc
cgcgaaatcggccacgggcgtctggccaagcgtgcgctggtcgcggtgctgccgaccaag
gaagagttcccctacaccatgcgcgtggtgtcggaaatcactgaatccaatggttcttcg
tcgatggcttcggtctgcggcggctgcctgtcgatgatggacgctggcgtgcccatgaag
gcgcatgtggccggtatcgccatgggcctgatcaaggaagacaaccgttttgccgtgctg
accgacatcctgggcgatgaagatcacctgggcgacatggacttcaaggtggcaggtacc
accgctggcatcacggcgctgcagatggacatcaagatccagggcatcacgaaggaaatc
atgcaggttgccctggcacaggccaaggaagcgcgcattcacatcctgggcaagatgcag
gaagccatgggcgaagccaagaccgaagtgagcaacttcgcgcccaagctctacaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgccgtgatccgtgcg
ctgaccgaagagaccggctgccagatcaacatcgaggaagacggcaccatcaccatcgct
gccaccgacaacgccaaggccgatgaagccaagcgccgcatcgagcagatcacggccgaa
gtcgaaatcggcaagatctacgaaggccccgtgaccaagattctggactttggcgcgctg
atcaacttgctgcctggcaaggacggcctgctgcacatcagccagattgcacacgagcgt
gtcgagcgtgtgggcgactacctgaccgaaggccagatcgtcaaggtcaaggtcatggaa
accgacgaaaagggccgcgtcaagctgtccatgaaggccctggccgagcgtcctgctggc
ggtagtgatcgtccggccccggcggagcgcggtgaccgtggtggtgagcgccgcgatggt
ggtcgtgatcgccagcccgctgatcagcagcaacagcagcagcaagccgtgcctgccgaa
ggcagcgctggtcagatgaacggttga
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