Granulicella tundricola: AciX9_1515
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Entry
AciX9_1515 CDS
T01411
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acm
Granulicella tundricola
Pathway
acm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AciX9_1515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acm03019
]
AciX9_1515
03400 DNA repair and recombination proteins [BR:
acm03400
]
AciX9_1515
Enzymes [BR:
acm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AciX9_1515
Messenger RNA biogenesis [BR:
acm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AciX9_1515
DNA repair and recombination proteins [BR:
acm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AciX9_1515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
ResIII
AAA_30
AAA_19
DUF6117
Motif
Other DBs
NCBI-ProteinID:
ADW68568
UniProt:
E8WX07
LinkDB
All DBs
Position
complement(1754942..1757401)
Genome browser
AA seq
819 aa
AA seq
DB search
MNLSTLLHETFGFPAFRANQEAVCRAATDGRDVLLVMPTGAGKSLCYQLPAIARGGTGLV
ISPLIALMDDQASKLTAAGLKVARIHSGLSREDSRQACRDYLDGKLQFLFIAPERMRVTG
FPEMLARRKPSLIAIDEAHCISAWGHDFRPDYRTLGDYLPQLRPAPIIALTATATPTVQR
DIVTQLNLQQPALFIHGFRRDNLHIEVMELSKPQRTEFITKFLADPTRRPAIVYAPSRKA
AEELAEKLNGTFKAAAYHAGLDPATRERVQTQFLSGNMEVVVATIAFGMGIDKANVRTVV
HAALPASVEAYYQEIGRAGRDGDPSRTILLYSYADRKMHDFFLERDYPVATDLARVARVL
NEDFQSPEELRHRLKMDADTFAKSVEKLAAQSAAAYDMGGNVRATGNHAWQSGYELQVQH
RRTQIDSIMQYAETQQCRMTALIRHFGDTADGHRPCGHCDFCAPNATTAQTFAEPSAQDD
RHLRTILRALDSSSKATGRLHTDLALTSDRKQFDGLLDGLARAGLITLSAETFTAADGKV
IPYKKAAITHEGRELSSSDPLGVVLRELSAAPTKSKSCASTPAKRKAEEEATNYTPAQKT
LEAALRNWRKEEAAKTGKPAFIVFTDASLRALVQHAPQTIPQLLQVPGIGPDKAERFGPA
LCAICRGTEIPGDYGTPAPKPAKRKAPDSKLETRDSELFNAKPSPISAPNRELRTENPQH
PHAPIIPHPPIRAAIPPRAESPGETLTPDQQALEQRLRDWRKAESERMGLPQFFVLGTTA
LRSIVLQRPSTLTQLQGIHGIGPDKLDRFGADILAVCNA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctccaccctccttcacgagaccttcggcttccccgccttccgcgccaatcag
gaagccgtctgccgcgccgccaccgatggccgcgacgtcctgctcgtcatgcccaccgga
gccggaaagtccctctgctaccagctccccgccatcgcacgcggcggcaccggcctcgtc
atctccccgctcatcgccctcatggacgaccaggcctccaagctcaccgccgccggcctc
aaggtcgcccgcattcactccggcctctcccgcgaggactcccgccaggcctgccgagac
tacctcgacggcaagctacagttcctcttcatcgcacccgagcgcatgcgcgtcacaggc
ttcccggagatgctcgcccgccgcaagccctccctcatcgccatcgacgaagcccactgc
atcagcgcctggggccatgacttccgcccagactacagaactctcggcgactacctcccg
cagctccgccccgcacccatcatcgccctcaccgccaccgccactcccaccgtccagcgc
gacatcgtcacccagctcaacctccagcagcccgccctcttcatccacggcttccgccgc
gacaacctccacatcgaggtcatggagctctccaagccgcaacgcaccgagttcatcacc
aagttcctcgccgaccccacccgccgccccgccatcgtctacgccccatcacgcaaggcc
gcagaagaactagcggaaaaactcaacggcaccttcaaagccgccgcctaccacgcaggc
ctggaccccgccacacgcgagcgcgtccagacccagttcctctccggcaatatggaggtc
gtcgtcgccaccatcgccttcggcatgggcatcgataaagccaacgtccgcaccgtagtc
cacgccgccctgcccgcctcggtcgaggcctactaccaggagatcgggcgcgccggacgt
gacggcgacccatcccgcaccatcctgctctacagctacgccgaccgcaagatgcacgac
ttcttcctggagcgcgactaccccgttgccaccgatctcgcacgcgtagcccgcgtcctc
aacgaagacttccaatccccggaagagctccgccaccgcctcaagatggacgctgacacc
ttcgccaagtccgtcgaaaaactagccgcgcaatccgccgccgcctacgacatgggcggc
aacgtccgagccaccggcaaccacgcctggcagtccggctacgagctccaggtccagcac
cgccgcacccagatcgactccatcatgcagtacgcggagacccaacagtgccgcatgaca
gccctcatccgccacttcggcgacaccgccgacggccaccgaccctgcggccactgcgac
ttctgcgcccccaacgccaccaccgcccagaccttcgctgagccctccgcccaggacgac
cgccatctccgcaccatcctccgcgccctggactccagcagcaaagccaccggtcgcctc
cacaccgatctcgccctcacctccgaccgcaagcaattcgacggcctcctcgacggcctc
gcacgcgccggcctcatcaccctctccgcggaaaccttcaccgcagccgacggcaaggtc
atcccctacaagaaagccgccatcacccacgaaggccgcgaactctcctcctcggaccca
ttaggcgtagtcctccgcgaactgagcgccgccccaaccaaatccaagtcctgcgccagc
acccccgccaaacgcaaggccgaagaagaagccaccaactacacgcccgcccagaaaacc
ctggaagccgccctacgtaactggcgcaaggaagaagccgccaagactggcaagcccgcc
ttcatcgtctttacagacgccagcctccgcgccctcgtccagcacgccccccagaccatc
ccccaactcctgcaagtccccggcataggcccggacaaggccgagcgcttcggtcccgcc
ctctgcgccatttgccgaggtacagagattcccggcgactacggcacccccgcccccaaa
cccgcaaagcgcaaggccccagactcgaaactcgaaactcgcgactcggaactcttcaat
gccaagccttctccaatctcggcacccaacagagaactgagaacagagaacccccaacac
cctcacgcccccatcatcccccacccacccatccgcgccgccatccccccacgcgccgag
tctcccggcgagaccctcacccccgaccagcaagcccttgagcagcgcctccgcgactgg
cgcaaagccgaatccgaacgcatgggcctcccccagttcttcgtcctcggcaccaccgcc
ctgcgcagcatcgtcctccagcgccccagcaccctcacccagctccagggcatccacggc
ataggcccggacaagctggaccgcttcggtgccgacatcctcgccgtctgcaacgcctga
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