Candidatus Andeanibacterium colombiense: P0Y56_05415
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Entry
P0Y56_05415 CDS
T09799
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acob
Candidatus Andeanibacterium colombiense
Pathway
acob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0Y56_05415 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acob03019
]
P0Y56_05415 (recQ)
03400 DNA repair and recombination proteins [BR:
acob03400
]
P0Y56_05415 (recQ)
Enzymes [BR:
acob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P0Y56_05415 (recQ)
Messenger RNA biogenesis [BR:
acob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0Y56_05415 (recQ)
DNA repair and recombination proteins [BR:
acob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P0Y56_05415 (recQ)
BRITE hierarchy
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
WEK47732
LinkDB
All DBs
Position
1070265..1072031
Genome browser
AA seq
588 aa
AA seq
DB search
MQPSPATLLHEVFGFEHFRGVQEQVVDRVLARQGTLAIMPTGAGKSLCYQLPAVALPGTC
VVISPLIALMHDQLRSASALGIRAASLTSADADWRATQDRLVAGELDLLYVAPERASGDG
FRALLERSNICLFAIDEAHCVSEWGHDFRPDYRLLRPLLDSFPQVPRLALTATADHHTRE
DILTQLGLPREGLIVSGFDRPNIRYTVQPRDGIGRQLTDILAANPGPGIIYAPTRAQTER
LAESLGAKGRPVRCYHAGLEPRQRAANQAAFIASEEMVMVATVAFGMGIDKPDVRFVVHA
GLPKSIEGYYQESGRAGRDGDPAQAILLWGADDFARARQRIGEVEPQRQQGERARIAALG
ALVETGTCRRAILLRHFGENPPATCGNCDNCLSPPAAVDGTEIAQKLLSAVYRTGQSFGL
GHIEAVLTGRSGDERIAKRGHDRLSVFGIVPAEDAHLLKPVSRALLVNGALETNEHGGLM
LGGTARAILKGEERLSFVLPPARERRSKRGTGEANPVGDPLFEALRELRRSLAQEAGVPP
YVIFHDSTLRELAAKRPLDDEALSHITGIGTRKREAYGPAFLEVIAAY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcagccctcccccgccaccctgctccacgaagtcttcggtttcgagcacttccgcggg
gtgcaggaacaggtcgtcgaccgggtactcgcacgccagggcacgctcgcgatcatgccg
accggcgcgggcaaatccttgtgctaccagcttccggcagtcgccctgcccggaacttgt
gtggtgatctcgccgctgatcgcgctgatgcacgaccagctccgcagcgccagcgccctc
ggcatccgcgccgcgagcctgacctcggccgatgccgactggcgcgcaacgcaggaccgg
ctggtcgcgggcgagctggatttgctctacgtcgcccccgaacgagcgagcggcgacggc
ttccgcgccttgctcgaacgctcgaacatctgcctgttcgcgatcgacgaagcgcactgc
gtcagcgaatggggccacgatttccgccccgattaccgcctgttgcgcccgcttctggac
agtttcccgcaagtcccgcggctggcgctgacggcgactgccgaccaccacacgcgcgag
gatattctcacccagctcggcctgccgcgcgaagggctgatcgtctcgggcttcgaccgg
ccgaacatccgctacaccgtccagccccgcgacgggatcgggcggcagttgaccgacatc
cttgccgccaatcccggccccggcatcatctacgcccccacccgcgcgcagaccgaacgc
ctcgccgaaagcctcggcgccaagggtcgcccggtgcgctgctatcacgccgggctcgag
ccgcggcagcgcgccgccaaccaggccgccttcatcgcgagcgaagaaatggtgatggtc
gcgacggtcgccttcggcatggggatcgacaagcccgacgtgcgcttcgtggtccatgcc
ggcctgcccaaatcgatcgagggctattaccaggaaagcggccgcgccgggcgtgacggc
gatccggcacaggcgatattgctatggggcgccgacgattttgctcgcgcgcgccagcgc
atcggcgaggtcgagccgcagcgccagcagggcgaacgcgcgcgcatcgccgcgcttggc
gcgctggtcgaaaccggcacctgccgccgcgcgatcctgctgcgccacttcggcgaaaac
ccgccagccacctgcggcaattgcgacaattgcctgtcgccccccgcggctgtcgacggc
accgagatcgcgcagaaattgctctcggcggtctatcgcaccggccagagcttcggcctc
ggccatatcgaggcggtgctgacgggaaggagcggcgacgaacggatcgcaaagcgcggg
catgaccggctctcggtcttcggcatcgtcccggccgaggacgcgcatctgctcaagccg
gtctcgcgcgcgctgctggtgaacggcgcgctcgaaaccaacgagcacggcgggctgatg
ctgggcggcaccgcgcgcgcaatcctcaagggcgaggagcgcctgtcattcgtgctgccc
ccggcccgcgaacgccgctcgaaacgcggcactggcgaggccaacccggtcggcgatccg
ctgttcgaagcgctgcgcgaactgcgccgcagcctcgcgcaagaggccggcgtcccgccc
tatgtgatcttccacgacagcaccctgcgcgaactggcggccaagcgcccgctcgacgat
gaggcgctgtcgcacatcaccggcatcggcacccgcaagcgcgaggcctacgggccggcg
ttcctggaggtgatcgcagcctattag
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