KEGG   Adelges cooleyi (spruce gall adelgid): 126844319
Entry
126844319         CDS       T09500                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
acoo  Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:acoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    126844319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acoo03400]
    126844319
Enzymes [BR:acoo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     126844319
DNA repair and recombination proteins [BR:acoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     126844319
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase BRCT mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 126844319
NCBI-ProteinID: XP_050438390
EnsemblRapid: LOC126844319
LinkDB
Position
Unknown
AA seq 885 aa
MEEGTSTVTEEKNFVAEKSKSSRAKCKKCKEILNQGSLRIAKVMPNPFGDGKMMAWHHPS
CLVAVFAKQRATTAKITCVDDIGGWDDLSMDHQKEIFTVFPDIPKERMKTKDDPTEVTPS
KKKNKTKAPQPSPPMPPKQTFYFKNFRKLCMQLSQENSYIQKTAIIKECFNAFLAKDSSD
KARADGLYLWCKMLLPNSEKRIYNLQSKQLIKLFSLMCKHNMAAMLEDLEKGDVAETLRL
FFEKSNNADMRPASKSTLTMTDVDIFLDKLSAETTENAQIELFKSISTKCTGNDLKMIIR
LVMHDLRINCGPKYILGAIHPNAYEAYQTSHNMETIIKNVCLHKELNAAAIETSDNANGA
KINVKLSLLTPILPMLAEPCKCLSDVFKKCPAGIYSEIKYDGERVQLHKSEKEFKFFSRS
LKPVLDHKVKMFKEYIPKAFQHGREMILDCEVLMYDRNTDKPLPFGTLGIHKKSQFEDAN
PCLFVFDCMYYNGVSLMDKSIVKRRQVLVQNMTEIKGHIMFSEVKEIHDTKELEQMVECV
LKQGLEGLVLKDLTGIYEPGKRHWQKVKKDYLFDGTMADSADLVVLGAWFGTGNKGGMMS
IFLMGCYDGTKDVWRTVTKVHGGHDEKTLERLQGELKMVKISKDADKVPRWLKCTKTMIP
DFVAEDPKKMPVWEISGAEFTQADVHTANGISIRFPRVTKIRDDKHWESATSLAELQRLF
DLSKQTEHLNLFSKNSPKGKKSPSKNSDSDNSSFQSSPEKQKKIKRTIDSVLQGSSNSKT
IAEPSKKKIKLTEDGPRRPLPDLFTGIRVVVPDSSQKNKFLRYFIAYGGTVIDDSDTSPA
THVIVANKCPSDQTPKSPKSAIAVNAQWFWDSIRSGKLLPIEKYQ
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggaggagggcacttccacagtaacggaagagaagaatttcgtagccgaaaaatcaaag
agcagtagggctaagtgtaagaaatgtaaggaaatcttgaaccaaggatcccttcgaatt
gccaaagtcatgcccaacccttttggcgatggaaaaatgatggcttggcatcatccctcg
tgcctagtggcagtgttcgccaaacagagagcgacaacagctaaaatcacttgtgtcgat
gatatcggtggttgggatgatctatccatggatcaccaaaaagaaatatttaccgtcttc
cccgacatccctaaagagagaatgaaaacgaaagatgatccgactgaagtcacgcccagt
aagaaaaagaataagaccaaagcacctcaaccgtctcctccaatgcctccaaaacaaacc
ttttattttaaaaactttcggaaactctgcatgcaactttctcaagaaaatagctatata
caaaaaactgccatcattaaagaatgttttaacgcgtttttggctaaagatagctcagac
aaagctcgagcagatggcttatatttgtggtgtaaaatgctgttgccaaattcggaaaaa
aggatttacaatttacaatcgaaacaattgatcaaactgtttagtctaatgtgcaaacat
aatatggctgccatgttggaagacttggagaaaggagacgtagccgagactttaaggtta
tttttcgaaaaaagcaataatgcagacatgagacccgcgtcgaaatcaacattgacaatg
accgacgtggacatattcttggacaaattgtctgcggaaaccaccgagaatgctcagatt
gagcttttcaaatcgatttcaaccaaatgcactggaaacgatttgaaaatgattattcga
cttgtaatgcacgacttaagaattaattgcggaccaaaatatatcctcggcgccattcat
ccaaacgcttacgaggcataccagacctcgcataacatggaaactataataaaaaatgtt
tgcttacataaagaattgaatgcggcagcgattgagacatctgataatgctaacggagcg
aaaataaacgtaaaactatcgcttttgacaccgattttacccatgctggctgaaccatgc
aagtgtcttagtgatgtgtttaaaaagtgtcccgccggcatttattcagaaatcaagtac
gacggagagcgcgtgcaacttcacaagagcgaaaaagagtttaaattcttctctaggagt
ttgaaacctgttttggatcacaaagtaaaaatgtttaaagagtacattcctaaagctttt
caacacggcagagaaatgatactcgattgtgaagtgctaatgtacgaccgaaacactgac
aagcctcttccattcggaactttgggcattcataagaaaagtcagtttgaagacgctaac
ccttgtttatttgttttcgactgcatgtactacaacggtgtttctttaatggacaaatcg
attgttaaacgtcggcaagtgctcgtgcagaatatgactgaaatcaaagggcatattatg
ttttcggaagtcaaagaaatacacgatactaaagaattagaacaaatggtagaatgcgta
cttaagcaaggtctcgaaggattagttctcaaagatttaaccggtatctacgagcctggt
aagagacactggcaaaaagtgaaaaaagattatttgtttgacggcacaatggcagacagc
gccgatctcgtggtcctcggtgcatggtttggtaccggcaataaaggcggtatgatgtca
atatttttaatggggtgctacgacggcaccaaagacgtctggcgcactgtgactaaagtg
cacggagggcacgacgaaaaaaccctggaaaggttacaaggcgaattaaaaatggtcaag
atcagcaaggacgccgacaaagtgccgagatggctgaagtgcaccaaaacaatgataccg
gatttcgtagcagaagacccaaaaaaaatgcccgtttgggaaatttccggagctgagttt
acacaagcggacgtacacacggcaaacggtatatccattagatttcccagagtcaccaaa
ataagagacgacaaacactgggaaagcgctacaagtcttgcggaactacagagattattt
gatttatccaaacaaaccgaacatttaaatcttttttccaaaaattcacccaaagggaaa
aagtctccatcgaaaaattcggattccgataatagttcgtttcagtcgtcgcccgaaaaa
caaaaaaaaattaagagaactattgattcggttttgcaagggtcgtctaattccaagact
atagcagagcccagtaagaaaaaaataaaactcaccgaagacggcccacggaggccttta
cccgacttgtttactggcataagagtggtcgttccagattcatcgcagaaaaacaagttc
ctgcggtattttattgcttacggaggaacagtcatagacgactcggacacatctccagcc
actcatgtcatagttgccaacaagtgtccttcggatcaaacacctaaatcgccaaagagt
gcaatcgctgtgaacgctcagtggttctgggacagtataagaagcggcaaattacttccc
attgaaaaatatcaataa

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