Adelges cooleyi (spruce gall adelgid): 126845570 Help Entry 126845570         CDS       T09500                                  Name (RefSeq) DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism acoo  Adelges cooleyi (spruce gall adelgid) Pathway acoo03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:acoo00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     126845570  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:acoo03400]     126845570 Enzymes [BR:acoo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      126845570 DNA repair and recombination proteins [BR:acoo03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      126845570 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT RNA_ligase BRCT_2 DNA_ligase_IV mRNA_cap_enzyme PTCB-BRCT Sigma70_r1_1 Peptidase_S24 Motif Other DBs NCBI-GeneID:  126845570 NCBI-ProteinID:  XP_050440237 EnsemblRapid:  LOC126845570 LinkDB All DBs Position Unknown AA seq 881 aa AA seqDB search METAPGKIQFKLFCRACEDIYKASQHDKKISILQKFIAMCRGSVDKSSDVEIEETFYPIL RCLLPALDKERGTYGVKEFMLGKMYVKILCLAKDSEDAQKLTNFRIPTNASGSFGDFADT VFWVVKKRFEEEGTLTLHEVNQHLDDIASKHAAHEPRQVENILQILLVKMSAIQQKWLIR LLLKDMRLGVAHKKILNVYHQDANDLYDVSNSLKKVCQMLNNPDVRLHEVSINLFDPFAP MLSQKCDVTDVDKIIKSQSDFFYVDTKLDGERFQLHWDKNQFKYFSRKGNDYTDTFGCNT SSGVLSPHLTKVFKSNVESCILDGEMMCYNKKLKSFTTKAKNIDVKHLREGNSHRPCFCA FDVLYLNSQVLTNEPLEKRLEILEKIVVPLDGIFMLTSRNIAKKNEILKYLNDAIDNRDE GIVVKDPRSIYKPGVRTAGWYKIKPEYTEGALSEFDLLIIGGYYGKGKKRDLISHFLMGL MENNDGMLKFTSIGRVGSGCKMEELEDLSRTLATHWIKVKPEIMPANINFNKEKPDLWIE PESSVILQIKATEIVTSNLFKAGTVLRFPRIQKVRYDKPWNHCMTVEEFNAIKVRTDGML CQDHIMEGQTPNKVRKAQTVASVSKQFRAPDLCDVTTTSEVLEGKEFCVMSDCEHLTKAQ IERKIHELGGSFVQNPGNNTFCVLANDLKSMRVNAIQKKGEHSIIKTKWMLYCFNDEEFL NWTPEHVLALSKEHKILMDVEYDTYGDSFTKEATVESLRSAMDKVELNDINVTEESFFKF QKDLFSEVHCFKAFGKCLVYFDDLNLDTLPTRNFHTNSVLEMIIFKFNGGTVCKEINNDT THVLVHSSNPKHIKKYESINSQREKPFLIVKENWVKEQIKL NT seq 2646 nt NT seq  +upstreamnt  +downstreamnt atggaaaccgcacccgggaaaatacaatttaaattattttgccgggcgtgtgaggatata tataaagcatcgcaacatgataaaaaaatcagcattctccaaaagtttatcgccatgtgt agagggtctgttgacaaaagctctgacgttgaaattgaagaaacattttatccaattcta aggtgtttacttccagcattagacaaggaaagaggaacctatggagttaaagaattcatg ttaggcaaaatgtatgtcaaaatactctgtctagctaaggacagcgaggatgctcaaaaa ctcaccaatttcagaattccaactaatgctagcggctcttttggtgattttgccgatacc gtgttttgggtggttaagaaacggttcgaagaagaaggcacattaactctgcatgaagta aatcaacacttagacgatattgcatcgaaacacgctgctcatgaaccgagacaagttgaa aatattttacaaatattgcttgtgaaaatgagtgcaatccaacaaaagtggctaatcaga ttattactaaaagacatgcgtttaggcgtagcacacaaaaaaatccttaatgtgtaccat caggacgctaatgatttgtacgatgttagcaacagtctaaaaaaagtttgccagatgttg aacaatccagatgtacgacttcatgaggtctcaataaatttatttgacccgtttgcaccg atgttgagccagaaatgtgatgttaccgacgtagacaaaatcataaaatcacaaagtgat tttttttacgtggacaccaaattggacggtgaacggtttcaattgcactgggacaaaaat caatttaaatacttcagccgtaagggaaacgattatacagacacgtttggttgtaacacg tcgagtggcgtactaagtccacatctaacaaaagtgtttaaatctaatgtcgaaagctgt attttggacggcgagatgatgtgctacaacaaaaaattaaaatcgttcacaactaaagct aaaaatattgacgtaaaacacttgcgagaaggcaactcccataggccgtgtttttgtgct tttgatgtcttgtatttaaacagtcaagtattgaccaacgagcctttagagaagcgatta gaaatccttgagaaaattgttgtaccattggatggaattttcatgttaacttcgagaaat attgcaaaaaaaaatgaaatattaaagtacttaaacgatgcaattgacaatcgagatgaa ggcattgttgtaaaagaccctcgatcgatttacaagccaggcgtacgaaccgccggatgg tataaaataaagccagaatatacagaaggggccttatcagaatttgatctattgatcatc ggcggttattatggcaaaggaaaaaaaagagatttaattagtcattttctcatgggtcta atggaaaacaatgacggtatgttgaaatttacttcgattggacgagtgggttcaggatgt aaaatggaagaattagaagacctatcaagaacattggccacgcattggataaaagtaaaa cccgaaataatgcctgccaatataaatttcaataaagaaaaacctgatctttggatagaa ccggaatcgtctgtaatattacagataaaagccacagaaattgttaccagtaatttgttt aaagctggaaccgtgctgagattccccagaattcaaaaagtacgatatgataagccgtgg aatcactgtatgaccgtggaggaattcaatgcgattaaagtgcgaacggacggcatgttg tgccaggatcacatcatggaaggacagacaccaaataaagtgaggaaagctcaaacagtt gctagcgtgagcaaacagtttcgagcgcctgatttgtgtgacgtaacaacaacgtcggaa gtgcttgaaggcaaagagttttgcgttatgtctgactgtgagcatttgactaaagctcaa atagaacggaaaattcacgagcttggtggctctttcgttcaaaatcccggcaacaacacc ttttgcgtgctcgccaacgacctgaaatcaatgcgggtcaacgctatacaaaaaaaagga gaacacagtataataaaaacaaaatggatgttgtattgttttaatgatgaggagttcctt aattggacaccagagcatgtgctggccttgtctaaggagcataaaatactgatggatgta gagtacgacacttatggcgatagtttcaccaaggaggcaaccgtcgaaagtctacggagt gcaatggataaagtcgaattgaacgacattaacgtcacggaggagagtttttttaaattt cagaaagatttattcagtgaagtccattgttttaaagcgtttggcaaatgtttagtatac tttgacgatttaaacctagatactttaccgaccagaaatttccataccaattcagttctg gaaatgattatttttaaatttaacggcggtacggtgtgcaaagaaataaataacgatacc acacacgttctagttcactcgagtaatccgaaacatatcaaaaaatatgaaagtataaat tctcaaagagaaaaaccttttctaattgtaaaagagaattgggtcaaagaacaaatcaaa ttatag

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