Alistipes communis: A5CBH24_25900
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Entry
A5CBH24_25900 CDS
T06592
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
acou
Alistipes communis
Pathway
acou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A5CBH24_25900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acou03019
]
A5CBH24_25900
Enzymes [BR:
acou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A5CBH24_25900
Messenger RNA biogenesis [BR:
acou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A5CBH24_25900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
ResIII
ERCC3_RAD25_C
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BBL05277
UniProt:
A0A3D3YM96
LinkDB
All DBs
Position
complement(3205408..3206526)
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AA seq
372 aa
AA seq
DB search
MNFQELNLPNALLRALRDKEYERPTPIQMQAIPAALEGRDILGTAQTGTGKTAAFALPVL
ANLLRRPPVGRGRPIRALILTPTRELALQIDESLGDYAKYTPLRTCVVFGGVNQRPQIDC
LKRGVDVLTATPGRLLDLIGQGHISLKQIEFFVLDEADRMLDMGFIHDIRRLLPLLPGQR
QTLLFSATMPKTIERLAADLLNDPVRVAVEPVASVVDTIEQRLCYVEKPEKKQALISALK
ENDGRSVLVFSRTKHGADRIARIVSKAGIGCDAIHGDKSQTARQRALSNFKAGKTRVIVA
TDIAARGIDIDQLEMVINYDLPDVAETYVHRIGRTGRAGHSGMALTFCASDERPMLADIQ
KLTGKKLRVIAG
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcaggaattgaatttgccgaatgcgctgttgcgcgcattgcgggacaaggaa
tacgaacgacccacgcccattcagatgcaggcgatccccgccgctttggaaggccgggat
atcctcggtacggcccagacgggtacgggcaagacggcagccttcgcgctgcctgttctg
gcgaacctgctgcgtcggccgcccgtcggccgcggacgtccgatccgggcgctgatcctc
acgcccacgcgcgaactggcgttgcagatcgacgagtcgctcggcgactacgccaagtac
acgccgctgcgtacctgcgtcgttttcggcggcgtgaaccagcgtccgcagatcgactgc
ttgaagcgcggcgtcgatgtgctgacagctacgccggggcgtctgctcgacttgatcggg
caggggcatatctcgttgaagcagatcgaatttttcgtactcgacgaggccgaccggatg
ctcgacatgggattcatccacgacatccggcgcttgctgccgttgcttcccggacagcgc
cagacgttgctcttctcggcgacgatgcccaagacgatcgaacggttggccgccgatctg
ctgaacgatcccgtgcgcgtcgccgtcgaaccggtggcgtcggtggtcgatacgatcgag
cagcggctctgctacgtggagaaacccgaaaagaagcaggccctgatctcggcgctgaaa
gagaacgacggccgttcggtgctggtcttctcgcgcacgaagcacggtgccgaccgcatc
gcgcggatcgtgtcgaaggccggtatcggttgcgacgcgatccacggcgacaagtcgcag
acggcgcgccagcgcgccctgtcgaatttcaaggcgggaaaaacgcgcgtgatcgtagcg
accgacatcgccgcgcgcggtatcgatatcgatcagttggaaatggtcatcaactacgac
ttgcccgatgtcgccgagacctacgtgcaccggatcggccgcacgggccgtgcggggcat
tcggggatggcactgactttctgtgcatcggacgaacgtcccatgctggccgatattcag
aaactcacgggcaagaaactgcgcgtgatcgcaggctaa
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