KEGG   Anopheles coluzzii: 120956021
Entry
120956021         CDS       T07312                                 
Name
(RefSeq) general transcription factor IIH subunit 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
acoz  Anopheles coluzzii
Pathway
acoz03022  Basal transcription factors
acoz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acoz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120956021
  09124 Replication and repair
   03420 Nucleotide excision repair
    120956021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acoz03021]
    120956021
   03400 DNA repair and recombination proteins [BR:acoz03400]
    120956021
Transcription machinery [BR:acoz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     120956021
DNA repair and recombination proteins [BR:acoz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     120956021
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 IBR C1_2
Other DBs
NCBI-GeneID: 120956021
NCBI-ProteinID: XP_040233307
LinkDB
Position
3:65185199..65187011
AA seq 421 aa
MADEEDPKEYRWETGYEKTWEAIKEDDDGLIEGSVSDIIQKAKRKRQAMKRGFSKLGMMR
HLYVLLDCSEAMTVPDLKPTRFICSLKLLELFIEEFFDQNPISQLGVIAMKAKRAEKISE
LGGTSRKHIKAVHALTNGVPLVGEPSLQNGLELALKTLRMIPQHASREILVIMGSLTSCD
PNDVHLTIENLKTEGVRCSVLSLSAEIRICKFLCTETGGLFGAVLDDAHYKDQLLQHIDP
PQAGNQQEFSLIKMGFPHGKTESGKEPPLTMCMCHIDSADEPAKLTSGGYHCPQCYSKYC
ELPVECSACGLTLASAPHLARSYHHLFPVPHFNELPLEQVQVQEPRDPPVTNCYACQKTL
ASGTDKMVYECDACKQVFCIDCDIFIHETLHSCVGCTTIPASAQTLQARKPVPPPHSMSI
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcggacgaagaggatccaaaggaatatcgctgggagacgggatacgagaaaacatgg
gaagcaatcaaagaggacgacgatgggcttatcgaaggatcggttagtgatatcatccaa
aaggctaagcgcaagcgtcaagcaatgaagcgcggcttcagcaagctcggcatgatgcgc
cacctgtacgtgttgctcgactgctccgaagcgatgacggttccggatctgaaaccaacg
cgcttcatctgttctcttaaactgctagaactgtttatcgaggagtttttcgaccagaat
cccatctcccagcttggcgtaattgcaatgaaggcaaagcgcgcggaaaagatttccgaa
ctcggcggtacctctcggaagcacattaaagcggtgcacgcactaaccaatggcgtaccg
ctggtcggtgaaccatcgctacagaacggtctggagctggcgctgaagacgctacgaatg
ataccacaacacgcaagcagagaaattttagttattatgggaagtttgaccagctgcgat
ccgaacgatgtccatctgacgatcgaaaatcttaaaacggaaggcgttcgatgctccgtg
ctgtctctgtcggcggaaatccgtatctgcaagttcctgtgcaccgaaacgggcgggttg
tttggtgccgtgctggacgatgcgcactacaaggatcagctgcttcagcacatcgatcca
ccgcaggccggcaatcagcaggaattttcgttgattaagatgggtttcccgcacggcaaa
acggaatcgggcaaggaaccaccgttgacgatgtgtatgtgccacatcgacagtgcggat
gagccggccaaactgacctcgggcggttatcactgcccccagtgctacagcaagtactgt
gagctaccggtggaatgttcagcgtgcggtttaacgttagcctctgcgccacatttagcc
cgcagctatcatcatctgtttccggtgccacattttaacgaactcccgctagagcaggta
caggtgcaggaaccgcgcgacccaccggtgacaaactgttacgcctgccagaaaacgctc
gcaagtggcacggataaaatggtgtacgagtgcgacgcctgcaagcaagtgttttgcatt
gattgcgatattttcatacacgaaacgctgcattcatgtgtagggtgtacgacgattccg
gcatcggctcaaactttacaggcacgaaagccggtaccaccaccgcacagtatgtctatc
atataa

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