Anopheles coluzzii: 120958182
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Entry
120958182 CDS
T07312
Name
(RefSeq) putative uncharacterized protein DDB_G0271606 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
acoz
Anopheles coluzzii
Pathway
acoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120958182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoz03000
]
120958182
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120958182
04121 Ubiquitin system [BR:
acoz04121
]
120958182
Enzymes [BR:
acoz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120958182
Transcription factors [BR:
acoz03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
120958182
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120958182
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120958182
Ubiquitin system [BR:
acoz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120958182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_2
YchF-GTPase_C
zf-UDP
Motif
Other DBs
NCBI-GeneID:
120958182
NCBI-ProteinID:
XP_040236734
LinkDB
All DBs
Position
3:42969158..43005617
Genome browser
AA seq
1464 aa
AA seq
DB search
MMNNSSGDEQVECPLCMEPLEVDDLNFYPCTCGYQICRFCWHRIRTDENELCPACRKAYP
ENPADFTPLSQEQIAAFKAEKRQRDQQRRAKISENRKHLANVRVVQKNLVFVVGLPPRLA
DPEILKKHEYFGKYGKIHKVVINPSTTYAGVQGPSASAYVTYINNNDALRAIQSVNNIMI
DGRLIKTSLGTTKYCSHFMKNQTCPKPDCMYLHELGDQEASFTKEEMHQGKHQEYEKRLH
DAMQAQLGLTSAAGGQGSNGSGSAAATAATAASSGGGTATAAPTAGLVSSTAAAVVAASA
TTAAAAVAAGTTAGASSTLVVNGGSAGSAGSGGGSGESGVPRSGGSSTSSSNGGSNGGKG
TSKTSPGSDIKQISDITNGPIPSKEAWPSLSTTPVGGSAHGGGSSNKENKLNGKTAVNGN
SAGNKENSNRSDRKHETKSRSKGGKNKQQQQQQHNNKNSHDNSSNHKDSTSNVTSANGVV
AAAKGGSAALVNGKGSKASNGKQQQRNGASNAPEAHEHAIVNGNSKEAQNNSKNLKQQQR
EREREQREQQSLLKGSSDSGEQQLQQKQQQPPQSKKREANGTSNGPTATSISNGNANGNG
HIINNDLDDDDDELDFEDLDNDALSSDNDGKTDSPSLSSSASSRNGVDSETASGKSTPGA
FVDTLNNGDSNVIDAGASVGDAVASKTDACETNAIPAATDGDAADSNRSSSSPSSSSSMG
DEKADSESTAPVASSSSTTTSLYGGLDDGTDTTAAVISATMGKLSVTDTTASNGGIMNHK
FANELIDLSARYGKLESILDDNSSFFSYNTFDPYGKPSAAGSTDLGVDSGSGNQSVGLTS
SQLPDLLSGTNDTNEQHAKELLKNMGNLQQQQQQQQQHQQHHQLQQHQHQQHLLQQVARF
QQQLSAGLIGNGDSSMIGGAGDELDPALTKCLLRQKYMVEDQQEEWLRLHQQQQQQQQQL
QQQQQQEQQKRNHLNNGLNGLPPFHNFNEFGTNDFWHKTYAMRNNFLSQQQQQQQQQQQQ
HQQQQRLHTDMSQMYGNANMSKLNKFFDFHKNQQQQQQQQQQQQQQFLLNGQNSLPQQAL
DMNLLALENSRLNNHFLDQHNENLLSSQQLHKQRLLNLGAHNPLLNGGDRSMPQHKASVA
AAAAAAASQSQQSGSRTQSQPQSQYPQNPTADDDLGFDPFLETQKALAELMNDEMNQQQL
PQSGSNHSKVLENVQQQQQQQQQQQQQQQQQQHQQQHQQQQRTRMPPPGFNHMNAFGFGV
PRAQGSKILPFMNGGMQMPNGQQPPQNGNWNQQVQQPFLGYQQNEHMAQPQNGLNKAAYG
NNLTDWTSMDPAIVSYRQFSFMNGPNQPAGGDLFLNAQQQQQQQQQMNQQQNLQPGQGFG
HHGLNLQSNLMGQQQQQQQQQQQQANPQLNFSHVNIINNERNVFMYEVANCGFPNGFDKY
SIPMPPGFQNNVPGNNKQKTECIN
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaacagcagcggcgatgagcaggtcgagtgtccactgtgcatggagccgcta
gaggtggacgatctgaatttctacccctgtacctgtggatatcagatctgtcgcttttgc
tggcaccggatccgcacggacgaaaacgagctgtgcccggcgtgccggaaggcgtacccg
gaaaacccggccgactttacgcccctgtcgcaggagcagattgcggcgttcaaggcggag
aaacggcagcgggaccagcagcggagggcgaagatttccgaaaaccgcaaacacctggcg
aacgtgcgggtggtgcagaagaacctggtgtttgtcgtggggttgccgcccagattggcc
gatccggagattctgaagaaacatgaatacttcggaaagtatggtaagatccataaagtg
gtcatcaaccctagtacaacgtatgccggtgtgcagggtccctcggcgtcggcgtacgtg
acgtacatcaacaacaacgacgcgctgagggcgatccaaagcgttaacaacatcatgatc
gatggtcgactgataaagacgagcttaggtacgacgaagtactgtagccactttatgaaa
aaccaaacctgtcccaagccggactgcatgtacttgcacgagctcggcgaccaggaggct
agctttacgaaggaggagatgcaccaagggaagcatcaagagtacgagaagcggctgcac
gatgccatgcaggcgcagttaggtctgacgtctgcagcaggagggcaaggcagcaacggc
agtggtagtgcggcggcaacggcagcgacggcggcgtcctctggcggtggtacggccacc
gcggccccgaccgccggcctggtgtcgtcgacggcggcggcagtggtggcggcgtcggcg
acaacggcagcggcggctgttgcggcgggaacaactgcaggtgcgtcctccacgctggtg
gtaaatggcggcagtgcgggtagtgcgggtagtggtggtggtagtggtgagagtggtgtg
cccaggtccggcggcagcagtaccagcagcagtaacggcggcagcaacggcggcaaaggg
accagcaaaacttcgcccggcagtgatatcaaacagattagcgacattaccaatggaccg
ataccgagcaaagaagcgtggcccagcttatcgacgacgccggttggcggcagcgcgcac
ggcggcggaagtagcaataaggagaataagcttaacggtaaaacagcagttaatgggaat
agcgccggcaacaaggaaaactcgaaccgaagcgaccgaaagcacgaaacgaaatctcgc
tcgaaaggaggcaaaaacaagcagcaacagcagcaacaacacaacaacaaaaatagtcac
gacaattccagtaatcataaagatagtacaagcaacgtgactagtgccaacggtgttgtt
gctgctgcgaagggtggcagtgcggcgttggtaaacggcaaaggaagcaaggcttcgaac
ggaaagcagcagcagcggaacggtgctagcaacgccccagaagctcacgagcatgcgatt
gtgaacggtaacagcaaggaggcacagaacaatagcaaaaacctgaagcagcagcagcgc
gaacgcgaacgggaacagcgggagcagcaatccctgctcaagggaagcagtgatagcggc
gagcagcagctgcagcagaaacagcagcaaccaccacagagcaaaaagcgagaagctaac
ggcaccagcaatggccccacggcgaccagcattagcaatgggaacgcaaatggaaacggc
catattatcaataatgatctggacgatgacgatgacgagctggactttgaggatctggac
aatgacgcactgtcgtcggacaatgatggcaaaacggattcgccttcgttaagtagttcg
gcttcctcccggaacggagtggacagtgagacggctagtggtaagagcacccccggtgcg
tttgtcgatacgcttaacaatggtgacagcaatgtgatagacgctggtgcatccgtcggt
gacgctgtcgccagtaagaccgacgcatgtgaaacgaatgccataccagccgccaccgat
ggggacgccgcggattcgaaccgcagctcctcgtcgccatcgtcgagctcgtcgatgggc
gatgaaaaggcggacagcgaaagtactgccccggtcgcctcctcatcctcgactacaacc
tcgttgtacggtgggctggacgatggtacggataccaccgcggccgtgatcagtgcgacg
atgggcaaactgtccgtcactgacacgactgccagcaacggtggtatcatgaatcacaaa
tttgccaacgaactgatcgacctgagcgcgcgctacggtaagctggaaagcatactggac
gacaatagtagcttcttctcgtacaacacgttcgatccgtacggcaagccgagtgcggct
ggcagcacggacctgggcgtggacagtggtagcggtaatcagagcgttggtttgacctct
tcgcaacttcccgatctcttgagcggtacaaacgacacaaacgaacagcacgcaaaggag
ctgttgaaaaacatgggaaatcttcagcagcagcagcagcagcagcagcagcatcagcaa
caccaccagcttcagcagcatcagcatcagcagcaccttctgcagcaagtcgcccgcttc
cagcagcagctctctgccgggcttatcggcaacggtgatagtagcatgattggcggtgcg
ggcgatgagctcgacccagccctcaccaaatgcttactgcggcagaagtacatggtggag
gatcagcaggaggagtggcttcgtctgcaccagcagcaacagcagcagcaacagcagctg
cagcagcaacagcaacaggagcaacagaaacgcaaccacctgaacaatggactgaatgga
ctaccgccattccataattttaacgaatttggaacgaatgatttctggcacaaaacatat
gctatgcgaaacaacttcctaagccagcagcaacagcagcaacagcagcagcagcagcaa
caccagcaacaacaaaggctacacacagacatgagccagatgtacggaaatgcaaacatg
tccaagttgaacaagttcttcgacttccacaaaaaccagcaacagcagcaacagcagcag
cagcagcagcagcagcaatttttactcaatggacaaaattcactcccgcagcaggcgctt
gacatgaacttgctagcgctggaaaacagccgtttgaacaaccatttccttgatcaacac
aacgaaaatttgttaagctcccagcagctccacaagcagcggctgcttaaccttggcgct
cacaatccgctcctgaacggtggagatcgttccatgccgcagcacaaggcatcggtagcg
gcagcagcagcagcagctgcttcgcagtcgcaacagtcgggcagcagaacccaatcgcag
ccgcagtcacagtatccccaaaacccgaccgccgacgatgaccttgggttcgatccgttc
ctggaaacccagaaggcactggccgagctgatgaacgatgaaatgaatcagcagcagctg
cctcagagcggctcgaaccacagcaaggtgctagagaatgttcagcagcagcagcagcag
caacagcagcagcaacagcaacaacagcagcagcagcaccagcaacagcatcaacaacag
caacgtacccgcatgccaccgcctggcttcaaccacatgaacgctttcggatttggtgta
ccacgggcacaaggcagcaaaattctacccttcatgaacggtggtatgcaaatgccgaat
ggacagcagccgcctcagaacggcaactggaatcagcaggtgcagcaacccttcctagga
tatcagcaaaatgagcacatggctcagccgcagaacggactcaacaaagcagcgtatggc
aataatctcaccgactggacgtcgatggacccggccatcgtttcttaccgtcagttctca
tttatgaacggaccaaaccaaccggccgggggtgatctgtttctgaacgctcagcaacag
cagcaacagcagcagcagatgaatcagcagcaaaatcttcaacctggacaaggtttcgga
caccatggtctcaacttgcagtcgaacctgatgggtcaacagcagcaacagcagcagcag
caacaacaacaagcaaatccacagcttaacttttctcatgtcaacatcatcaacaacgag
cgaaacgttttcatgtacgaagtagccaactgcggtttcccgaacggcttcgacaagtac
tcgatcccgatgccaccgggctttcagaataacgtccccggcaacaacaagcagaaaacc
gaatgcatcaactaa
DBGET
integrated database retrieval system
