Acidiphilium cryptum: Acry_1754
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Entry
Acry_1754 CDS
T00527
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
acr
Acidiphilium cryptum
Pathway
acr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Acry_1754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acr03400
]
Acry_1754
Enzymes [BR:
acr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acry_1754
DNA repair and recombination proteins [BR:
acr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Acry_1754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
Helicase_C
CarD_TRCF_RID
MFD_D3
ResIII
UB2H
RecG_dom3_C
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ABQ30958
UniProt:
A5FZC6
LinkDB
All DBs
Position
complement(1934517..1937951)
Genome browser
AA seq
1144 aa
AA seq
DB search
MSLLTVYGAPEGFDADLIARRAAEAGTVLHIARDDARLARLEDALAFFAPAAEIIRFPAW
DCLPYDRVSPNPAIVADRVAALARLLEPAKGTRIVLTTVNAAVQRTPPRARFADASRTIA
PGGAAPPDDLARFLEQRGYHRVGTVMEPGDFAVRGGIFDVWPSGEPAPARIDLFGDTVDT
LRRFDPGTQRSGEALPSLTFRPASELPLDADSISRFRTGFRELFGAEALTDPLYESVSEG
RRHPGMEHFAPLFCATMETVFDYAPGAAISLDHQAEEAAAARFEMIADHYEARSAPPRAG
EAPYRPVAPARLYLDRAGLDALLRARGATVFSPFSRPEGAEGVEAGGRPGAILASAQGIA
SVYEEFRLLAARWREAGRRVVLAAWSAGSRDRLAALLRDHGMRSIPIDNAAEARIAQGDA
VLLAVLGLERGYVADDLAIVAEQDLLGQRIARPPRRRQRADQFIADATEIAEGDLVVHQD
HGIGRYDGLVTLSVEGAPHDCLRILYDGDQKLFLPVENIDMLSRFGSETAGVGLDRLGGA
SWQARKAKARNRIRDMAAGLIRIAAERKLHDAAILAADDGAFAEFCARFPYTETEDQARA
IADVMEDLAAGKPMDRLVCGDVGFGKTEVALRAAFIAAMSGAQVAVVVPTTLLARQHYRL
FSERFAGLPIRVEQLSRLVSAKDTAKVKAGLADGTVNIVVGTHALLSKTIAFADLALLIV
DEEQHFGVAHKERLKQLKADIHVLTLTATPIPRTLQLALTGVRDLSLITTPPVDRLAVRT
FIMPWDKLVIREAIARERFRGGQIFCVVPHIEDIDRMRERLAEIAPDLRTATAHGRLPPT
EIERVMTEFSEGKHDVLLATNIVESGLDMPAVNTILIWRADLFGLGQLYQLRGRVGRGKQ
RGYAYLTWPASHTLAASSQKRLEVMQTLDTLGAGFTLASHDLDLRGAGNLLGDEQSGHIR
EVGIELYQQMLEDAVAELRAAGGSESREAARDWTPNISLGLPVLIPEAYVADLPVRLGLY
RRIGGLATDAESEALAAELVDRFGPMPEEVENLLATVALKRACRAVGVEKLEAGPKGMVV
AFRGNAFANPGGLVAWLATRAGLLRLRPDHKLVMVREMDVKARLAAARDIISNLQRIIDQ
SKAA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcaccgtctacggcgcgccggaagggttcgacgccgacctgatcgcccgc
cgcgccgccgaggcgggcacggtgctgcacatcgcgcgcgacgatgcccgcctcgcccgg
ctggaggacgcgctcgccttcttcgcccccgccgccgagatcatccgcttccccgcctgg
gactgcctgccctacgaccgcgtctcgcccaacccggcgatcgtggccgaccgcgtcgcc
gccctggcccggctgctggaaccggcgaagggcacccgcatcgtgctgaccacggtgaac
gccgcggtccagcgcaccccgccgcgcgcgcgcttcgccgatgccagccgcaccatcgcc
cccggcggcgccgccccgccggacgatctcgcccgcttcctcgaacagcgcggctatcac
cgcgtcggcaccgtcatggagccgggcgacttcgccgtgcgcggcggcattttcgatgtc
tggccctccggcgagccggcgccggcccgcatcgacctgttcggcgacacggtggacacg
ctccgccgcttcgatcccggcacccagcgcagcggcgaggcgctgccctcgctcaccttc
cgccccgcctccgaactcccgctcgacgccgactcgatcagccgcttccgcaccggcttc
cgcgagctgttcggcgccgaggcgctgaccgacccgctctacgaatcggtctccgagggc
cgccgccatcccggcatggagcatttcgcgccgctcttctgcgcgacgatggaaaccgtg
ttcgactatgcgcccggtgccgccatcagcctcgaccaccaggccgaggaggccgccgcc
gcccgcttcgagatgatcgccgatcactacgaggcccgctccgccccgccccgcgccggc
gaggcgccgtaccggccggtcgcgcccgcgcgcctctatctcgaccgcgccggcctcgat
gcgctgctccgcgcccgcggggcaaccgtgttctcgcccttctcccggcccgagggcgcc
gagggcgtggaagccggcggccgccccggcgccatcctcgcctccgcccagggcatcgcc
tcggtctatgaggaattccgcctgctcgccgcccgctggcgcgaggccgggcgccgcgtc
gtcctcgccgcctggtccgccggctcgcgcgaccgtctcgccgccctgctgcgcgaccac
ggcatgcgctcgatcccgatcgacaacgccgccgaggcccgcatcgcccagggcgacgcc
gtgctgctcgccgtcctcggtctcgaacgcggctatgtcgccgacgatctcgccatcgtc
gccgagcaggacctgctcggccagcgcatcgcccgcccgccgcgccgccgccagcgcgcc
gaccagttcatcgccgacgctaccgaaatcgccgagggcgatctcgtcgtgcatcaggat
cacggcatcggccgctatgacgggctggtgacgctgagcgtcgagggcgcgccgcatgac
tgcctgcgcatcctctatgatggcgaccagaagctcttcctgccggtcgagaacatcgac
atgctctcccgcttcggcagcgagaccgccggcgtcgggctcgaccgcctgggcggcgcc
tcctggcaggcgcgcaaggccaaggcccgcaaccgcatccgcgacatggcggccggcctc
atccgcatcgccgccgagcgcaagctgcacgacgccgcgatcctcgccgccgatgacggc
gccttcgccgaattctgcgcccgcttcccctacaccgaaaccgaggaccaggctcgcgcc
atcgccgacgtgatggaagatctcgccgccggcaagccgatggaccggctggtctgcggc
gatgtcggcttcggcaagaccgaggtcgcgctccgcgccgccttcatcgccgcgatgtcc
ggcgcccaggtcgccgtggtggtgccgaccacgctgctcgcccgccagcactaccgcctg
ttctccgagcgcttcgccggcctgcccatccgcgtcgagcagctctcccgcctcgtctcc
gccaaggataccgcgaaggtgaaggccggcctcgccgacggcacggtgaacatcgtcgtc
ggcacccatgcgctgctgtcgaaaacgatcgccttcgccgacctcgcgctgctgatcgtc
gacgaggagcagcatttcggcgtcgcccacaaggaacggctgaagcagctcaaggcggac
atccacgtcctcaccctgaccgcgacgccgatcccccgcaccctccagctcgcgctgacc
ggcgtgcgcgacctctcgctgatcaccaccccgccggtcgaccgtctcgccgtgcgcacc
ttcatcatgccgtgggacaagctggtgatccgcgaggccatcgcccgcgagcgcttccgc
ggcgggcagatcttctgcgtcgtcccgcatatcgaggatatcgaccggatgcgcgagcgc
ctggccgagatcgcgccggacctgcgcaccgccaccgcccatggccgcctgccgccgacc
gagatcgagcgggtgatgaccgagttcagcgaaggcaagcacgacgtcctgctcgccacc
aacatcgtcgaatccgggctcgacatgccggcggtgaacacgatcctgatctggcgcgcc
gatctcttcggcctcggccagctctaccagctgcgcggccgcgtcggccgcggcaagcag
cgcggctacgcctatctcacctggcccgcctcgcacacgctcgccgcctcctcgcagaag
cgcctcgaagtgatgcagacgctcgacacgctcggcgccggcttcaccctcgcctcgcac
gatctcgacctgcgcggcgccggcaacctgctgggcgacgaacagtccggccatatccgc
gaggtcggcatcgagctctaccagcagatgctggaggatgcggtggccgaactgcgcgcg
gccggcggcagcgaatcgcgcgaggccgcgcgggactggacgccgaatatcagcctcggc
ctgcccgtcctcatccccgaagcctatgtggccgacctgccggtccgcctcggcctctac
cgccgcatcggcggactcgcgaccgatgccgagagcgaggcgctcgccgccgagctggtc
gaccgtttcggcccgatgcccgaggaggtggaaaacctcctcgccacggtggcgctgaag
cgcgcctgccgcgccgtcggcgtcgagaagctggaggccgggccgaagggcatggtcgtc
gccttccgcggcaacgcattcgccaatcccggcggcctcgtcgcctggctcgccacccgc
gccggcctgctccgcctgcgcccggaccacaagctggtcatggtccgcgagatggacgtg
aaggcccgcctcgccgcggcccgcgacataatatcgaacctgcaacgcattatcgaccag
tcgaaggcggcatga
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integrated database retrieval system