Aliiroseovarius crassostreae: K3J57_08190
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Entry
K3J57_08190 CDS
T08444
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acro
Aliiroseovarius crassostreae
Pathway
acro03410
Base excision repair
acro03430
Mismatch repair
acro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3J57_08190 (recJ)
03430 Mismatch repair
K3J57_08190 (recJ)
03440 Homologous recombination
K3J57_08190 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acro03400
]
K3J57_08190 (recJ)
DNA repair and recombination proteins [BR:
acro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K3J57_08190 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K3J57_08190 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K3J57_08190 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UWP90625
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All DBs
Position
1728193..1729938
Genome browser
AA seq
581 aa
AA seq
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MSFLGVDSSATGRRWVGPGIEAERQGEHLHQLTQLPLPLCKILAQRGIGAEGAAEFLDPT
LKALLPDPRGLKDMEIAASRTLQAFDQREKVAIFADYDVDGATSAALLIDWFRQMGRDVT
LYIPDRIDEGYGPNVPAMELLAADHSLIICVDCGTLSHEPIAAARAKGADVVVVDHHLGG
ETLPPAVAVVNPNRQDELDAPGYLCAAGVVFLMLVELGRMLREAGRTGPDLISMLDLVAL
GTVADVAPLIEANRALVRQGLKIMARRARPGMVALADVSGMNEAPRAYHLGYMMGPRVNA
GGRVGRADLGARLLSTTDMHEAQAIAARLNDLNAERREIEANVQALALEQAEARGLDAPL
VWAAGEGWHPGVVGIVASRLKEATNRPAVVIGFDGDDGKGSGRSIAGVDLGASIQRLASD
GVIQKGGGHKMAAGLSLSRDQLEPAMNRLSDLLAKQGAGLQGAADLRLDGVLMPSAVTVD
LIEELEQAGPFGASAPAPRFAFPDVQILFAKRVGQNHLKLSFGDGMGTRIDAISFGAFDG
PLGPLLENHAGRRFHLAGKLEVNHWQGRSSPQLRLDDASTA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctcggggtagacagctctgccacgggccgacgctgggtcggaccggggatc
gaagcagaacgccagggcgaacacctgcaccaactgacccaattgcccctgcccctgtgc
aaaatccttgcgcagcgcggcataggtgccgagggggctgcggaattcctcgatcccaca
ctcaaggcgctgctgcctgatccgcgtggtttgaaggatatggagatcgccgcatcccgc
accttgcaggcctttgatcagcgggaaaaagtcgccatatttgccgattacgacgtggat
ggggcaacctcggccgcgctgcttatcgactggtttcgccagatggggcgcgatgtcacg
ctttatatccctgaccggatcgacgaaggctatggccccaatgtccccgcgatggagctg
ctggcagcggatcatagcctgatcatctgcgttgactgcggcacactgagccatgagccg
attgcggcggccagagccaaaggtgcggatgtggtggtggtcgatcaccacctgggtggc
gaaaccctgccgcctgccgtggcggtggtgaacccgaaccgtcaggatgaactggacgcg
ccgggctatctctgcgcggcgggagtggtgtttctgatgctggtcgagctgggccggatg
ttgcgcgaagcagggcgcaccggacctgacctgatttccatgctcgaccttgtggccctt
ggaacggttgcggatgtggcaccactgattgaggcgaaccgggcattggtgcgtcagggc
ctgaagatcatggcccgccgcgcccgccccggcatggtggcgctggcggatgtatccggc
atgaacgaagcgccccgcgcctatcaccttggctatatgatggggccacgggtgaatgcc
ggggggcgtgttggccgggccgatctcggcgcgcgcctgctgtcgaccaccgatatgcac
gaggcgcaggccattgcggcacggctgaatgacctgaatgcagagcggcgcgaaatcgaa
gccaatgtgcaggcgcttgcgctggaacaggccgaagcccgcggactggacgcccctctg
gtctgggccgcaggtgagggctggcatcccggtgtggttggcatcgtggcctcccgcctg
aaagaggccaccaaccgcccagccgtggtgatcgggtttgatggcgatgacggcaaagga
tcggggcgctcaattgcgggggtcgatcttggggcatccattcagcgactggcctcggac
ggtgtcatccagaaaggtggcgggcacaagatggccgcagggctgagcctgtcgcgtgac
cagctggaaccggccatgaaccgcctgagcgaccttctggcaaaacagggggccggattg
cagggggccgcggacctgcgccttgacggagtgctgatgccctcagccgttaccgtggac
ctgatcgaagaactggagcaggccggaccgtttggggcctctgcccctgccccgcgcttt
gcctttccggatgtgcaaatcctgttcgcaaaacgggttgggcaaaaccatctgaaactc
agcttcggcgacgggatgggcacgcggattgatgccatttcttttggggcttttgatggg
ccactcggccctcttctggaaaaccatgccggtcgccgctttcatctggccggcaagctg
gaggtgaatcactggcagggcagatcaagcccgcagctgcgccttgatgacgcctcaact
gcctga
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