Anolis carolinensis (green anole): 100553529
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Entry
100553529 CDS
T01608
Symbol
ifih1
Name
(RefSeq) interferon induced with helicase C domain 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04622
RIG-I-like receptor signaling pathway
acs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100553529 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100553529 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
acs04054
]
100553529 (ifih1)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100553529 (ifih1)
Pattern recognition receptors [BR:
acs04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100553529 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
CARD_2
ResIII
Helicase_C
DEAD
SNF2-rel_dom
SWI2_SNF2
CARD
TetR_C_5-like
TF_Zn_Ribbon
DUF3638
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
100553529
NCBI-ProteinID:
XP_003226281
Ensembl:
ENSACAG00000014017
UniProt:
H9GKP0
LinkDB
All DBs
Position
Un
Genome browser
AA seq
1006 aa
AA seq
DB search
MAEESPSRDASILALISVFRHRIKRNMQVMRVLDWMPSLSPEDKDRIRAEERAAGNVAAA
GLLLQVLERAEPRPAPGLCQEFYQALVEGGYTAAAAYLDPSLMPSPSLEAAGDEGAFLLG
LFEFVLVEQLRATQVAMACLEEGLFHDEDLERVKAEDARGNCPAVRELLCRIVQKKDWFS
PFVKVLRKTGHEKAADALCGQENGSVNGVSAPVDEMTAADRPLAPDVVRDLNQSAELDPR
AAGEDNAIEDSFGAASAMSESEASLLDENVNDTNESFMASDDSDDVVDRKQRDSPEPELC
LRDYQMEVAQPALEGKNILLCLPTGSGKTRVAVYIAKDHLDKKKDAGEEGKVIVLVNKVP
LVEQHFRKEFHPYLKHSYKVIGLSGMTQLKISFPKVVKDNHVIICTAQILENALQNAEQD
EEEGVQLSVFSLIIIDECHHTQKEAVYNNIMRRYLKQKMQNEKRRKMGKPLVPQPQILGL
TASPGVGGAKNHSKAEEHILKICANLDAYGITTVRTNDLGLNSQVKEPRKKIDIADDKTK
DPFREELVNIMMKIQGYCQFNPNAEFGSQTYEQWVVQEEKKAAKEENRKHHICAEHLKKY
NDALLINDTIRMIDAYNHLKNFYKEEKSKKMAVNEEEDEEEAVASKPDETDIFLMDLFYG
KKDMLQKLATVAKYENEKLKLLRETLMTEFTKKPEARGIIFTKTRQSAFALYEWIKENPK
FEEAGVKAHYLIGAGHNSEFKPMTQNEQKDVIEKFRIGKINLLIATTVAEEGLDIPECNI
VIRYGLVTNEIAMVQARGRARADESTYVLVASGGSGAAEREGVNVFREKMMHRAIKRVQD
MPRAEYDNKIRGFQLQSIMEVKMKAKKEQSKAYKKDPSLIKFLCKNCTKLICSGEDIEVI
ENMHHVNVKKEFKGLYVVRENKTLQAKAADYQTNGEVICKDCGQVWGSMMVHRGLDLPCL
KIKNFVVVFNEKKTTRKDMCKKWAELPIRFPEFSYANNYDFSDEED
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagagcccgtcccgcgacgcctccatcctggccctgatttcggtcttcagg
caccggatcaagcgcaacatgcaggtgatgcgggtgctggactggatgccctcgctgagc
cccgaggacaaggaccgcatccgcgcggaggagcgggcggcgggcaacgtggcggcggcc
gggctgctgctccaggtgctggagagggccgagccgcgccccgcgccgggcctgtgccag
gagttctaccaggcgctggtggagggcggctacacggcggccgctgcctacctggacccc
agcctcatgccctcgccttccctggaggccgccggcgacgagggcgccttcctgctcggc
ctcttcgagttcgtgctggtggagcagctccgggccacgcaggtggccatggcctgcctg
gaggaggggctcttccacgacgaggacctggagcgggttaaagctgaagatgccaggggg
aattgcccggcagtgagagaattactgtgcaggatagtgcagaagaaggactggttctcg
ccatttgtgaaagtcctgcgcaaaactggacatgaaaaagctgcagatgccctatgtggg
caggaaaatggtagcgtaaatggagtttctgcacctgtggatgagatgacagcagctgac
aggcctctggctcctgacgttgtgagggatttgaaccagagtgcagaacttgatcccagg
gctgctggggaggataatgccatagaagactcatttggggcagcctctgcaatgtcagag
tctgaagccagcttgctggatgaaaatgtaaatgatacgaatgaaagcttcatggccagt
gatgattcagacgatgttgtggatagaaaacagagagattcacccgaaccagagctgtgt
ctcagggactaccaaatggaagtagctcaaccagccttggaagggaagaacattctgttg
tgcctccctacaggcagtggcaagacccgagtggctgtttacattgccaaagatcatctg
gacaagaaaaaagatgcaggggaagaggggaaagttatagtccttgtcaacaaggtgcca
ttggtggagcaacatttccgaaaagagtttcacccttatttgaagcactcttataaagtg
attggactgagtggcatgacgcagctgaaaatctcattcccaaaagttgtcaaagataat
catgtcatcatctgcacagctcagattcttgagaatgcattgcaaaatgcagagcaagat
gaagaagaaggagtccagttatcagtgttctccctgatcattattgatgaatgccatcat
actcagaaggaagccgtttataacaacatcatgcgccggtatttgaaacaaaagatgcag
aatgagaaacggaggaaaatggggaaaccactagttcctcaacctcagattctgggcctg
acagcttcacctggtgtaggaggggcaaaaaatcattccaaggctgaggaacatattctg
aaaatttgtgccaatcttgatgcatatgggatcacaacagtcaggacaaatgacttaggt
ctgaatagtcaggtgaaggagccacggaagaagattgatattgcggatgataaaacaaag
gatccatttagagaagaacttgtgaacataatgatgaagatccagggctattgccagttc
aacccaaatgctgagtttgggtcccagacctacgagcagtgggtagttcaagaggagaag
aaagctgccaaggaagagaatcgcaaacaccatatctgtgcagaacacttgaagaaatac
aatgatgctttactgattaatgacaccatccgaatgatagatgcatataaccatctcaaa
aatttttataaggaggagaaaagtaagaagatggcagtgaatgaagaagaagatgaggag
gaggcagtagcatccaaacctgatgaaacagacatatttcttatggatttattttatggc
aaaaaggatatgctacaaaaattagcaactgtggccaaatacgaaaatgaaaaactgaaa
ctcttgcgtgagaccttaatgactgaattcacaaagaaacctgaagcgaggggaatcatt
tttacaaagacacggcaaagtgcatttgccctttatgagtggattaaagagaaccccaaa
tttgaagaagctggagtgaaggctcactaccttattggtgctgggcataatagtgaattt
aagcccatgactcagaatgaacagaaggacgtaattgaaaaattccgtattggaaaaatc
aacctgctgattgctacaactgtggcagaagaaggcctggatatcccagagtgtaacatc
gtcatacgctatggtcttgttaccaatgaaatcgctatggtgcaggcccgcgggcgagct
cgagctgatgaaagtacctatgtgcttgtggcgtcaggtgggtcaggggctgctgagcgt
gaaggtgtcaatgttttccgagagaaaatgatgcatagagccattaagcgtgttcaagac
atgccccgagcagaatatgacaataagattcggggcttccaactgcaaagcataatggag
gtaaaaatgaaagcgaagaaagagcagtctaaagcatacaagaaagatccatccttgatc
aagttcctctgcaaaaactgcactaagctgatatgttcaggtgaagatattgaggtcatt
gagaatatgcatcatgtcaatgtcaaaaaagaatttaaaggcctttatgttgtaagagaa
aacaagacactgcaagcaaaagccgcagactatcaaacaaatggggaagttatctgcaaa
gattgtggacaagtgtggggaagcatgatggtacaccgaggtctagacctgccttgccta
aaaataaaaaactttgtggttgtattcaatgagaagaaaactacccgaaaggatatgtgc
aaaaaatgggcagagctgcccattaggtttccagagttcagttatgcaaataattatgat
tttagtgatgaagaagattaa
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