Anolis carolinensis (green anole): 100567133
Help
Entry
100567133 CDS
T01608
Symbol
tnr
Name
(RefSeq) tenascin R
KO
K06252
tenascin
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04510
Focal adhesion
acs04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100567133 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100567133 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acs00536
]
100567133 (tnr)
Glycosaminoglycan binding proteins [BR:
acs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100567133 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
Pur_ac_phosph_N
EGF_2
Interfer-bind
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
100567133
NCBI-ProteinID:
XP_008107154
Ensembl:
ENSACAG00000014785
UniProt:
G1KQK0
LinkDB
All DBs
Position
4:complement(71896260..72553582)
Genome browser
AA seq
1356 aa
AA seq
DB search
MGVDGENAILRNILVGFNLMLLGSIFRPFECRLEVMTERVKRQVADEDGNFVNYTTPIKE
QPMVFSHIYNINVPLDSLCSTSLEASSGTEVSSEDDRMTEYTEQTSDSESQVTFTHRINL
PKQTCKCVASSRDMQELLSRIEMLEREVSILRDQCNSNCCQDNAATGQLDYFPHCSGHGN
FSLESCGCICNEGWTGKNCSEPLCPMGCSSRGVCVDGQCICDGDYSGEDCSEARCSTDCS
FRGLCVDGECICEEGFAGEDCSELRCPADCSGKGKCANGTCICQEGYVGEDCGQLRCLNA
CSGRGSCQEGLCSCEEGYQGQDCSAVAPPESLRVAAISDRSIDLEWDGPMAVTEYVVSYQ
PAVSAGLQLQQRVPGDWSAVSIKELEPGLIYNISVFAVISEVLSVPVSVKVATQLSTPEG
LKFKTITETTVEMQWKPFAFSFDGWEISFIPKDNEGGVIAQLPSSVTTFNQTGLKPGEEY
TVNVVALKEQARSPPASASVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDHILLKYGL
ENGEGGKTTFRLQPPLSQYSMQALRPGSKYEVSIAAVRGTNESTAVFAHFVTEIDAPKNL
HVVSRMSDRLELEWDNSEAEVKTFKVVYSTLAGEQYHEVLVPRSPGVTTRVTLTDLIPGT
EYGVGISAVMDGKQSVPATMNARTELDSPHDLIVTASTETSISVSWTKAKGPIDHYRVTF
IPASGMASEVTVAKDQSEFTLSDLEPGTEYTISVIAERGRQQSLEVTVDAFTGFRPITQL
HFSHVTSSSVNITWSDPSPPADKLILNYSPRDKEETKQVMLDPTKRHAALTGLQPSTEYM
VSLVAVHGPISSEPIIGSIVTGIDPPRNLTIDNVTTDSVTFHWAPPIASFDHYRIACKSA
EGRVDSIVVAKGVTEYTLSHLQPATEYEIFLKTVRGREESEPLSHIMYTAMDNPESLTAT
NITPTEALLKWEIPTAEVENYVIVLTHDTVAGETILVDGSNQEYQLINLLPSTSYGVTMY
ATNGPVTSRTIFTNFTTLLDPPSNLTATEVTRRSALLSWLPPMAEIENYIMTYRTPDGSR
KELIVDAEDTWIRLEGLSENTEYTVRLQAAQNAVRSGFTSTIFTTGGRVFMNPQDCAQHL
MNGDTLSGIYTISLNSDLNQRIQVYCDMNTDAGGWIVFQRRQNGLTDFFRKWAEYRTGFG
NLEDEFWLGLDNMHKITSQGRYELRIDMRDGQESAYAYYDKFSIGDARSLYKLRIGDYNG
TAGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGIN
WYHWKGHEFSIPFVEMKMRPYNHRNTLGRKRRSMQQ
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggatggtgaaaatgccattctaaggaatattctggttggtttcaacttaatg
ctgcttggctccatctttaggccctttgagtgccgccttgaagtgatgacagagagagtc
aaaagacaggtggctgatgaggacggcaactttgtcaactacacaacacctatcaaagaa
caacctatggtcttcagccatatatataacattaatgtgcctctggacagcctctgttca
acttcactagaggcttcatctggcacagaggtgagttcagaagacgaccggatgacagaa
tacacggagcagacttctgacagtgagagccaggtcacctttacgcacaggattaacctt
cccaaacagacttgcaagtgtgtcgcctcctcccgggacatgcaggagctgctgagcaga
attgagatgctggagagggaggtgtccatcctccgggaccaatgcaactccaattgctgc
caagacaatgcagccacagggcagctggattacttcccccactgcagtggccatggaaac
tttagcctggaatcctgtggctgcatttgcaatgaaggctggactgggaagaactgttca
gagccgctctgccccatgggctgctccagccgaggcgtgtgtgtggatggccaatgcatc
tgcgatggcgattatagtggggaggattgctccgaggcacgctgctctaccgactgcagt
ttccggggactctgtgtggacggagaatgcatctgtgaagagggctttgctggtgaagac
tgcagtgaactcagatgtcctgcagactgctcagggaagggaaagtgtgccaacgggact
tgcatctgccaggaggggtatgtgggggaagactgtgggcagctgagatgccttaatgcc
tgcagtggacgtggatcctgccaggaaggcctatgctcttgtgaggagggctaccagggc
caagactgctcagcagttgctccacctgagagtctgcgtgtggctgctatcagtgaccgg
tcaattgaccttgaatgggatggcccaatggcagtgaccgaatatgtggtttcctaccag
ccagcggtgtctgcaggcctgcagctccagcaacgcgtccctggtgactggagcgctgtc
agtatcaaggagttggagccaggcctgatctacaatatcagcgtctttgctgttatcagc
gaagtgcttagtgtccctgtcagcgtcaaagtggccacacaactgtctactccagaaggg
ctgaagttcaaaacaatcacagagaccaccgtggagatgcagtggaagccctttgcattc
tcgtttgatggctgggagatcagcttcatccccaaggacaatgaagggggtgtaattgca
cagctccctagcagtgtgacaactttcaaccagacggggctgaaaccaggtgaggagtat
acagtcaatgtggtagccctcaaggaacaagcccgaagtccacctgcctcagccagtgtg
tcaacactcattgatgggccgacccagattttggtgcgagatgtctcagatacagtggcc
tttgttgaatggactccacctcgggccaaagttgaccacatccttttgaagtacggccta
gagaatggggaagggggaaaaaccaccttccggctccagcctcccctgagtcagtattcc
atgcaggccctgcgaccgggttcaaaatatgaagtctctattgctgctgtccggggcact
aatgaaagtacagctgtattcgcccactttgtaacagaaattgatgctcccaagaacttg
catgtagtctctcggatgtcagaccgcctggaacttgaatgggacaacagtgaggcagag
gtgaagaccttcaaggtggtgtacagcaccctggcaggcgagcagtaccatgaggtcttg
gtgccgcggagtccaggcgtcactaccagagtcaccctcacagatctgataccaggaaca
gaatatggagttgggatttcagctgtaatggatggaaagcaaagtgttcccgctactatg
aatgcaaggaccgagctcgacagtcctcatgatctcatagtgacagcatccacggagaca
tccatttctgtgtcctggacgaaagccaagggccccattgatcactaccgagtcaccttc
atccctgcttcgggaatggcatctgaggttaccgttgccaaggaccagtctgagtttaca
ttgtcagacttggaacccgggactgagtacactatctctgtcattgctgagagaggccgt
cagcagagccttgaggtcacagtggatgcctttacagggttccgacccatcacacagctt
cacttttcgcatgtgacttcctccagtgtgaacatcacttggagtgatccctcccctcca
gcagataaactcatactgaactacagtcccagagacaaagaggaaaccaaacaagtgatg
ctggatccgaccaagagacatgctgccttgactggcctgcaaccctccacagaatacatg
gtctccttggtggctgtgcatggccccatcagctctgagcccattattggctccatcgta
acaggaattgatccacctagaaacctgactattgataatgtgacgacagattctgtgact
ttccactgggcccctcctattgcatcctttgaccactataggatagcctgtaaatctgct
gaaggacgagtggacagcatagttgttgccaaaggtgtcaccgagtacacactcagccac
ctacagccggctactgagtatgagatctttctgaagactgtgcggggcagagaggaaagc
gaacctctttcacacatcatgtatacagctatggataatccagagagtttgactgccaca
aacattaccccaacagaagccctgctgaagtgggaaatacccactgctgaagtggagaat
tatgtcattgtgctcacacatgacacagttgcaggagagactatcttagtggatggtagc
aatcaagaataccagctaatcaacttgctcccaagtaccagctatggagtcaccatgtat
gctactaatgggcctgtcaccagcagaaccatcttcacgaactttaccactcttttagat
cctccatcaaatctaacagcaactgaagtgactcgacggagtgcactcctttcatggctg
cctcccatggctgagattgagaactatatcatgacctatcggacacctgatggaagccgt
aaggagctgattgtggatgccgaggacacttggatccgcctagaagggctttcagaaaac
accgagtacacagtgcgcctccaagcagcccagaatgctgtaaggagtgggttcacctcc
accatattcacaacaggaggccgtgtgtttatgaatcctcaggactgtgcccagcatttg
atgaatggtgacacattgagtggtatttatactatctccctgaacagcgacctcaaccag
agaatacaagtgtactgtgatatgaacacggatgctggtggatggattgtgttccagagg
cgacagaatgggctgacagatttctttcggaagtgggcagagtatcgcactggctttgga
aacctagaggatgagttctggctgggactagataacatgcacaagatcacttcacaagga
cgctacgaactgcggatagatatgcgagatggccaggaatcagcctacgcctattatgac
aagttctctattggagatgccaggagcctgtacaagctccggataggagactacaatggc
actgctggggattcactcacctatcatcaggggcgtccattttccaccaaagacagggat
aatgatgttgctgttacaaactgcgccatgtcatacaaaggagcctggtggtacaagaac
tgccaccggactaatctcaacggcaaatatggagaatcccgacacagccagggcattaac
tggtatcactggaaaggacatgaattctccattccctttgtggaaatgaagatgcggccc
tacaaccatcgcaacaccttgggaaggaaacggaggtctatgcagcagtga
DBGET
integrated database retrieval system