Aspergillus clavatus: ACLA_000810
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Entry
ACLA_000810 CDS
T01148
Name
(RefSeq) transcription factor and DNA repair complex, core TFIIH, putative
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
act
Aspergillus clavatus
Pathway
act03022
Basal transcription factors
act03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACLA_000810
09124 Replication and repair
03420 Nucleotide excision repair
ACLA_000810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
act03021
]
ACLA_000810
03400 DNA repair and recombination proteins [BR:
act03400
]
ACLA_000810
Transcription machinery [BR:
act03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACLA_000810
DNA repair and recombination proteins [BR:
act03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACLA_000810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
4708495
NCBI-ProteinID:
XP_001276096
UniProt:
A1C4Q2
LinkDB
All DBs
AA seq
456 aa
AA seq
DB search
MADSDEEYIGELSEEENNASVRGSHGTAHASRSKRRKQRGGAEWEVSRTWETLVEGADGT
ISSTVEGLLEAGKRKRLLRDTTPLQRGIIRHLVLILDLSQSMMEKDLRPTRYLLTLRYAQ
EFVREFFEQNPISQLGVLGLRDGLAIRISDMSGNPTEHISAIQALRDHDAKGLPSLQNGL
GMARGALFHTPSHGTREVFIVFGSLLSSDPGDIYRTIATLVNDKIRVRIVGLAAQVAICR
ELCSRTNGGDDTTYGVALNEQHFRELMMDVTTPPVTYSQKQSTSSLLMMGFPSRTVESCP
SLCACHSKPSCGGYSCSRCNSKVCGLPAECPSCGLTLILSTHLARSYHHLFPLMNWVEVP
WQQASRSSACFACGVYFPAVPPNDQWQTTESQAKGMSVSSRYECTVCKNHFCIDCDLFAH
EVVHNCPGCQSGIMAQGKRGSHKDHPDADEMDISAY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcggatgaagagtatatcggagaactctccgaagaagagaacaatgccagt
gtgcgcggctctcatgggactgcgcatgcatcccgttccaagagaagaaagcagcgagga
ggcgccgagtgggaagtctcgcgaacatgggaaacgctagttgagggtgcggatggcaca
atcagctctacggttgaagggcttctagaggctgggaaaaggaagaggcttttgagagat
acaacgcccttgcaacgtggtataatccggcatctcgtcctaattctggacctatcccag
tcaatgatggagaaagacctgaggccaacacggtaccttctcaccctacggtatgcacaa
gaattcgtgcgggaattcttcgagcagaatcctatatcccaactcggcgtactcggtttg
agggacgggcttgcaattcggatcagcgacatgagtggaaatcctacggagcacatcagt
gccatacaagctttgagagatcacgatgccaaaggtctccctagtctacaaaacggactc
gggatggctcgtggcgctctctttcatactccaagtcatggtacccgagaagtctttatt
gtgtttggctctctcctttcctccgaccccggggacatatatcggacgatagccacctta
gtaaatgataagatacgcgtgaggattgttggtctggccgctcaggtggctatttgccgt
gaactctgctcaagaactaatggtggtgatgataccacttatggagtggcgctcaacgag
cagcactttcgtgaattaatgatggatgtaacaacaccgcctgttacatattctcagaaa
caatccacaagctccctcttgatgatgggattcccgtctcgtactgttgaaagttgtcct
tctctctgcgcctgccactctaaaccatcttgcggagggtattcgtgttcacggtgcaat
agcaaagtctgtgggctccccgccgaatgtccatcttgcgggctaaccttgatcttgtct
acacatcttgcaagatcttaccatcatttatttccactcatgaattgggttgaggttccg
tggcaacaggcctcgcgcagttcagcatgctttgcttgcggcgtatacttccctgcagtg
ccccctaacgatcagtggcaaactacggagtcacaagcaaagggaatgagtgtgagcagc
cgctatgaatgcacagtttgcaagaatcatttctgtattgattgcgacctcttcgctcat
gaagttgtgcacaattgccctggctgtcagagcgggatcatggcccaggggaaaagaggc
tcacacaaggatcatcctgatgcagatgaaatggacatttcagcatattaa
DBGET
integrated database retrieval system
