Actinomyces sp. Chiba101: CHIBA101_1251
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Entry
CHIBA101_1251 CDS
T05279
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
actc
Actinomyces sp. Chiba101
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actc03019
]
CHIBA101_1251
Enzymes [BR:
actc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CHIBA101_1251
Messenger RNA biogenesis [BR:
actc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CHIBA101_1251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
IstB_IS21
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
BAW93109
UniProt:
A0A1Q2TN63
LinkDB
All DBs
Position
complement(1440878..1443841)
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AA seq
987 aa
AA seq
DB search
MTPPRLPDTAASPAERYAAARRRQADARTELAVFAAGLDFELDDFQVAGCQALERDEGVL
IAAPTGAGKTVVGEFAVHLGLAKGLKTFYTTPIKALSNQKYLDLARRHGTERVGLLTGDT
SINPHADVIVMTTEVLRNMLYSGSKDLERLGYVVMDEVHYLADRFRGPVWEEVIIHLAPE
VRVVSLSATVSNAEEFGQWLGEVRGSTAVVVSEHRPVPLTQHMIVGRRLLPLYSHSQAAS
VAALEDARGDGAPPADSAPALNPDLVKAVRAAQRAAAEGAASKSRGGDGPRHWKSGGRAP
RRGAGGARLGRLRPPSRLTVISALEEADLLPAIVFVFSRAGCEAAVGQAMAGGVDLTTRE
ETEAIREIIDRRTSAIPARDRGVLGFHSWASALERGVAAHHAGLLPVFKETVEELFSAGL
VKVVYATETLALGINMPARTVVLESLRKWNGSAHVTLSPGEYTQLTGRAGRRGIDTEGHA
IVLAADDVEPSLVSSLASRRTYPLVSAFRPTYNMAVNLLGRTSRERAREVLESSFAQFQA
DRGVVELAAQARRKRRGLEELEARMSCHLGDFREYAALRQEIAEAEADLSSERRSARRVE
AGRSMASLRRGDVVVYRKGRRSRHAVVLSGGEDRTGAPALTVLGEDGRVVTLSPDTSPDG
VMRLGSLRVASSVDVRRREHRDRLVGRLIDAIRSGTLSEAPVRKRRRTSPAQRRGEADGR
AQATTAERIEDLRRRLRAHPCHGCPDREEHARVGRKWARARAEAARIMSRIETRTGTIAR
LFDAVCEVLLQLGYLEPAEEGRPEAELRVTSAGRLLARIYAERDLLIAECLRSGLWDALG
PAELAGAVSACVYEPRLSAQSLGLPVSPDSGLGQVLRGELRISRSINDLEGLGRIAHSPG
AEPALAGAVAAWARGAGLAEVLDATDMTAGDFVRWAKQLLDVLGQLAGLVPEPGTDARAA
EALTALARTAAEASLDVGRGVVAWSGV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgccccgcctcccggacaccgccgcctcgcccgcggagcgctacgccgccgcc
cgccgccgccaggccgacgcccggaccgagctcgccgtcttcgccgccgggctcgacttc
gaactcgacgacttccaggtcgccggctgccaggcacttgagcgcgatgagggggttctg
atcgccgcgcccaccggggccggcaagaccgttgtcggggagttcgccgtccacctggga
ctggccaagggcctcaagaccttctacaccacgcccatcaaggccctgtccaaccagaag
tatctcgacctggcgcgccgccacggcaccgagcgcgtcggcctgctcaccggcgacacc
tcgatcaacccccacgccgacgtcatcgtcatgaccaccgaggtcctgcgcaacatgctc
tactcgggctcgaaggacctcgaacgcctcggctacgtcgtcatggacgaggtccactac
ctcgccgaccgcttccgcggccccgtgtgggaggaggtcatcatccacctcgcccccgag
gtgcgggtcgtgtccctgtccgctacggtttccaacgccgaggagttcgggcagtggctc
ggtgaggtgcgggggagcaccgccgtcgtcgtctccgagcacaggcccgtgcccctcact
cagcacatgatcgtcggccgcaggctcctgcccctgtactcccacagccaggccgcctcc
gtggccgccctggaggatgcccgaggcgacggcgccccgccggcggactccgccccggct
ctcaatcccgatctcgtcaaggcggtgcgcgccgcccagcgggccgcggccgagggcgcc
gcgtcgaagagccgcggcggggacggtccccggcactggaagagcggtgggcgagccccc
cggcgcggtgcggggggcgcccggctggggcgcctccgcccgccctcccgcctgaccgtc
atcagcgccctcgaggaggccgacctcctgcccgcgatcgtcttcgtgttctcccgggcg
ggctgcgaggcggccgtcggccaggcgatggccgggggagtggatctgaccacccgggag
gagaccgaggccatccgggagatcatcgaccgccgcacgtccgccatccccgcacgggat
cgaggagtcctcggcttccactcctgggcctcggcgctggagcgaggcgtggccgcgcac
catgcgggcctgctcccggtgttcaaggagaccgttgaggagctcttcagcgcgggcctg
gtcaaggtcgtctacgccaccgagaccctggcactcggcatcaacatgccggcgcgcacg
gtcgtcctggaatcgctgcgcaagtggaacggctccgcccatgtcaccctcagtcccggc
gagtacacgcagctcaccggtcgcgcggggcggcggggcatcgacaccgagggccacgcg
atcgtcctggccgccgacgacgtcgagccctccctcgtctcctcgctggcctcccggcgc
acctacccgctcgtctccgccttccgccccacctacaacatggcggtcaatctgctgggc
cgcaccagccgcgagcgggcgagggaggtcctggagtcctccttcgcccagttccaggcc
gaccggggcgtcgtcgagctcgccgcgcaggcccgccgcaagcgccgcggcctggaggag
ctcgaggcccggatgagctgccatctcggggacttccgcgagtacgccgccctgcgccag
gagatcgccgaggcggaggcggacctgtccagcgagcgccgctcggcccgccgcgtcgag
gcagggcggtccatggcctccttgcggcgcggcgacgtcgttgtctaccgcaagggacgg
cgctcccggcacgcggtggtcctctccggcggggaggaccgcaccggggccccggcgctg
accgtcctgggcgaggacgggcgcgtggtcaccctcagcccggacacctcgcccgacggc
gtcatgcggctgggctccctgcgcgtggccagcagtgtggacgtgcgccgccgcgagcac
cgcgaccggctcgtcgggcgcctcatcgacgccatccgctcaggcacgctctccgaggcg
cccgtgcgcaagcgccgccgcaccagccccgcccagcggcgcggcgaggcggacggccgt
gcccaggcgaccaccgccgagcgcatagaggacctgcggcgccggttgcgagcccacccg
tgtcacggctgcccggaccgcgaggagcacgcccgcgtgggacgcaagtgggccagggcc
cgcgccgaggccgcccggatcatgtcccgcatcgagactcgcaccggcacgatcgcccgg
ctcttcgacgccgtctgcgaggtcctcctgcagctgggctacctcgagcccgccgaggag
gggcgccccgaggccgagctgcgggtcacgagcgccgggcgcctcctcgcccgcatatac
gccgagagggacctcctcatcgccgagtgcctgcgctccgggctctgggacgcgctgggg
ccggccgagctcgccggggcggtctcggcctgcgtgtacgagccgcgcctgagcgcacaa
tccctgggcctgcccgtctccccggacagcgggctggggcaggtcctgcgcggcgagctg
cggatctcccggtccatcaacgacctggagggcctggggcgcatcgcccactcgccgggt
gcagagccggcactggccggggccgtggccgcctgggcgcggggagccgggctggccgag
gtcctcgacgccaccgatatgaccgccggggacttcgtgcgctgggccaagcagctcctc
gacgttctgggccagctcgccggactcgtccccgagcccggcaccgatgcgcgcgccgcc
gaggcgctgaccgcgctggcgcgcaccgccgccgaggcgagcctcgacgtcggcagaggg
gtggtcgcatggtccggggtgtga
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