Actinoplanes sp. NBRC 14428: Asp14428_63480
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Entry
Asp14428_63480 CDS
T08315
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
actr
Actinoplanes sp. NBRC 14428
Brite
KEGG Orthology (KO) [BR:
actr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actr03021
]
Asp14428_63480 (rpoS)
Transcription machinery [BR:
actr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Asp14428_63480 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BCJ54873
LinkDB
All DBs
Position
complement(6779705..6780715)
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AA seq
336 aa
AA seq
DB search
MVLQMKATESTVVTAENIMTDGVEALADLDATDERGVSADLVRAYLNGIGRTRLLTAVEE
VTLSKRIEAGLYAEEKLPEASDDLAPLFEIIVAEGRAAKNHLLEANLRLVVSIAKRYTGR
GMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMV
EQVNRMVRARRDLAAQLGREPGVAEIAQAMGVPEFQIIELISYDREPVSLDQAVGEDGES
ALGDFVAAVDPNAEPGSTVTQGELRNEVEIVLATLSERESAVIRLRFGLDDGRQRTLDEV
GREFGLSRERIRQIEKVTMSKLRDPQRAARLEAYAS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtggtcctgcagatgaaggcgacggagtccacggtggtaaccgccgagaacatcatgact
gacggtgtcgaggccctggccgacctggacgccaccgacgagcgcggcgtctccgccgac
ctcgtccgggcgtacctcaacggcatcgggcgcacccggctgctgaccgcggtcgaggag
gtcaccctctccaagcgcatcgaggccggcctctacgccgaggagaagctccccgaggcg
agcgacgacctggcacccctcttcgagatcatcgtcgccgagggccgcgccgcgaagaat
cacctgctggaggcgaacctgcgcctcgtggtgagcatcgcgaagcgctacaccggccgc
ggcatggcgttcctcgacctgatccaggaaggcaacctcggcctcatccgcgccgtcgag
aaattcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgccag
gccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatggtc
gagcaggtcaaccgcatggtccgggcccgccgcgacctcgccgcccagctcggccgcgag
cccggcgtcgccgagatcgcccaggccatgggcgtgccggaattccagatcatcgagctg
atctcgtacgaccgggagccggtcagcctggaccaggcggtcggcgaggacggcgagagc
gccctcggcgacttcgtggccgcggtggacccgaacgccgagccgggcagcacggtcacc
cagggcgagctgcgcaacgaggtggagatcgtgctcgccaccctgtcggagcgcgagtcc
gcagtgatccgcctccgcttcggcctcgacgacggccgccagcgcaccctcgacgaggtg
ggacgcgagttcggcctcagccgcgagcgcatccgccagatcgagaaggtgacgatgtcc
aagctgcgtgacccgcagcgggcggcgcgcctggaggcgtacgccagctga
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