Agrobacterium cucumeris: KZ699_12890
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Entry
KZ699_12890 CDS
T09081
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
acuc
Agrobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acuc03400
]
KZ699_12890 (addB)
Enzymes [BR:
acuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KZ699_12890 (addB)
DNA repair and recombination proteins [BR:
acuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KZ699_12890 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WHO07963
LinkDB
All DBs
Position
1:complement(2696400..2699585)
Genome browser
AA seq
1061 aa
AA seq
DB search
MTTSRHEKRVLTIAAGTPFLKTLAETLCDGTLTAGYRYDPADPLSLAKVTIYVPTRRSAR
VLRSEFVDLLGGRSAILPLIRPLGETDDDSGFFDIENPEIMDLAPPISGTGRLIELARLI
LAWRNSLPDAIRAIHSDSPLVAPASPADAIWLARALGEVIDAMDTEEKDWEALQHLDTGE
HAQWWQLTADFLKIASVFWPARLAELNRSSAGRHRNGILRAEANRLANLPDTGPIIVAGS
TGSIPAAADLIAAVAALPQGVVVLPGLDLAMSEEQWEAIAEDPTDPSSRTHSQYGLYMLL
QKLGILRDDVDQIGAIDSDLEKRAAVFSAALAPAKSTSDWNRWREDRDPGFFDEAFAAAT
LIEAANEREEATAIAVALRLALEAPGAGRPSQAALITPDRGLARRVATELQRFGIEADDS
AGTPLSATPRAGLTQLALEAILRPGDPVPIISLLKHPLSRFGLSEAAFTQASKALELIAL
RGGRVETEIGNLEAVLEAQLLAQHDDRHPPAWRLALPEGSLEAARDLAQRIAVATEPLGS
AFVRRDQSGRAFTDKLPLSHWAERTGRVIEAICADENNDLAALWSGEAGDTLSGLFGELM
ESGEILDADGPQWADIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVVIGGLNEG
LWPGQTANNPFLSRTMKTAIGLEPPERRIGQLAHDFEMANGTRQIFYTRALRQGSTPAVA
SRWLQRLLALGGEDFAGELKKRGETYRHWAGLMDESIDQDAAKRPAPKPPANLQPTRYSF
SEVGRLRRDPYSIYARRILKLDPLEPFNRDPSAADRGTLYHAIIERYSREGHIPGTPASF
DAMQRILDECFDAENLPPHVDVIWRPRFAAVARAFIDWEKERHPSIRHSFFEARAGQEIA
EAGIRLTGIADRIDIKSNGHADIIDYKTGLAPSVNQARALLDPQLALEAAALMRGAFREA
GSPTPENLIYVRLRPGDRFFPDQVNNEHSSRSGKRPPKSAIELATESIEQLAKFVRSLRE
GENGFASRLVPEEQQSYGGEYDHLARVSEWSTAEPGDGDDD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtcccgccacgaaaagcgcgtcctgacgatcgctgcgggaacaccgttcctc
aaaacgctcgcggaaacgctgtgtgacgggacactgacagccggctatagatatgaccca
gccgacccgctttcactggccaaggtgacgatctatgtgccgacgcgacgttccgcccgc
gtactgcgctccgaattcgtcgaccttctgggaggcagatccgccattctgccgctgatc
cgaccgctcggcgaaacggacgatgatagcggctttttcgatatcgaaaatcctgagatc
atggatctcgcaccaccgatttccggcaccggccggctgatcgaactggcgcgtcttatt
ctggcctggcgcaacagcctgccggacgccatccgggcgatccattcggattcgccgctc
gttgcccccgccagccccgccgatgccatatggctggcgcgtgcgcttggcgaggtgatc
gatgcgatggatacggaagaaaaggattgggaagcgcttcagcatctcgataccggcgaa
catgcgcaatggtggcagctgacggcggatttcctgaagatcgccagcgtcttctggccg
gcgcgccttgccgaactcaaccgctcctcggccggccggcatcgaaacggcatattgcgg
gccgaggcaaaccgacttgccaatttgccggatacgggaccgatcatcgtggccgggtct
accggctccattccggccgcagccgacctcatcgccgccgttgccgccttgccgcagggc
gtcgtcgtgcttccggggcttgatcttgccatgtcagaggagcaatgggaggcaattgcc
gaagacccgaccgacccttccagccgtacccattcgcaatacgggctctatatgctgctg
cagaagctcggcatcctacgcgacgacgtggatcagatcggagctatcgatagcgatctt
gaaaaacgcgcggccgttttttcagcggcgctcgctccggccaagtccaccagcgattgg
aaccggtggcgcgaagacagggaccccggcttcttcgatgaagcttttgcggcggccaca
ctgatagaagccgccaacgagcgcgaagaggcaaccgccatcgcggtggcgctcaggctg
gcgctggaagctccgggtgccggacgtccttcgcaggccgcactgataacacccgaccgc
ggcttggcgcggcgggtggcgacggaattgcagcgtttcggcatagaggccgacgattcg
gccggtacgccactttctgccacaccgcgggccgggctgacacaactggcgctggaagcg
atcctgcggcccggagacccggtgccgatcatttcgcttctgaagcatccactctcccgt
ttcgggctttcggaggcggcgttcacacaagcctcaaaagcgctggaactcatagcactg
cgtggcggccgcgtcgaaaccgaaatcggcaatctggaagcggttctggaggcgcagctg
ctggcgcagcacgatgaccggcacccacccgcctggcggctggcattgccggaaggaagc
cttgaagcagcccgcgatctggcgcagcggatcgccgttgcaaccgagccgcttggttct
gccttcgtgcgtcgggatcaatctggccgggcctttaccgacaaattaccactctcccat
tgggcggagcggacgggccgcgtgatcgaagccatctgtgcggatgaaaacaatgatctt
gccgcgctctggtccggtgaggctggtgatacgctttccggcctgttcggcgaattgatg
gaaagcggcgaaatcctcgatgcggacgggcctcaatgggctgacatatttgcggcgctg
gttgccggggaatcgatcaaaccgcgatccatgcgtcatccacgcatctttatcttcggt
gcgctcgaagcccgcctgcaaagcgtcgacaccgtcgtcattggcgggctcaatgaaggc
ctctggccgggccagacggcgaataacccattcttgtcccgcaccatgaagaccgctatc
ggacttgagccgccggaacggcgcatcggccagctggcacatgactttgagatggccaac
ggcacccgacaaatcttttacacccgggcgttgaggcagggctcaacgccggctgtcgct
tctcgctggctgcaacgattgctggcactgggtggtgaggatttcgccggagaactgaag
aagcgtggcgagacctatcggcattgggccggtctgatggatgaaagcatcgatcaggac
gcggcaaagcgccctgcccccaagccgccggctaatctgcagccaacccgttattccttc
agcgaagtgggacggctgcgccgcgatccctattcgatctatgcgcggcgtatcctgaag
cttgacccgctcgagcccttcaaccgcgatccaagtgccgctgatcgcggcacgctctat
cacgcgatcatcgagcgttattcgcgtgaggggcacatccccggcacgccggcttcgttc
gacgccatgcaacgcattctggacgaatgtttcgacgcggaaaacctgccgccgcatgtg
gatgtcatctggcggccacgttttgcggcggtggcacgtgccttcatcgactgggagaag
gaacgtcatccatccattcgccacagctttttcgaggcacgcgccggccaggaaatagcc
gaagcggggataaggttgaccggaattgccgaccgcatcgacatcaagtcaaacggtcac
gcggatattatcgactacaagaccgggcttgcgccttcggtcaatcaggcgcgcgcgctg
cttgacccacaactggcgctggaagcggcggcgctgatgcgcggagccttccgcgaagcc
ggttcgcccacgccggaaaaccttatctatgtgcgcctgcggccgggcgatcgttttttt
cccgaccaggtcaataacgaacattccagtcgcagcggcaaaagaccgccaaaatcggcc
attgaactggcgacggaatcgatcgagcaacttgccaaattcgtgcgctcactgcgcgaa
ggcgagaacggtttcgcctcgcggctggtgccggaagagcaacaatcctatgggggggaa
tatgaccatctcgcccgggtttcggaatggtccacggcggaaccgggagacggcgatgac
gattga
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