KEGG   Athene cunicularia (burrowing owl): 113480146
Entry
113480146         CDS       T05777                                 
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
  KO
K14328  regulator of nonsense transcripts 3
Organism
acun  Athene cunicularia (burrowing owl)
Pathway
acun03013  Nucleocytoplasmic transport
acun03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acun00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113480146 (UPF3B)
   03015 mRNA surveillance pathway
    113480146 (UPF3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acun03019]
    113480146 (UPF3B)
Messenger RNA biogenesis [BR:acun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     113480146 (UPF3B)
   mRNA cycle factors
    P-body specific factors
     113480146 (UPF3B)
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 113480146
NCBI-ProteinID: XP_026704566
LinkDB
Position
4
AA seq 422 aa
MTTYYISSFGAGPVVQASEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLF
RDRFDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSAD
DEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQRE
EERRKWKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEKDEKDLEKKEKSK
KLEKETLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDFERDREYERAQRE
KQRRQEEERRRQSERFEKLFRRREEEVKKERDLIREKGKKSDLTDFTSSMDKSEKVTKDD
KKEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKPTDQGVDKKQEREISNMKE
EE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgactacatactacatcagcagcttcggtgcagggcctgttgttcaggcttcagagcat
ctccagcccctgcccgagcacgactacttcgagttcttcgctaacgattccagcttgtac
cctcacatgttctcgagagcctacatcaactttaaaaaccaggaagacatagtcctcttc
agggatcgttttgacggctatgtttttgtcgatcacaaaggtcaggaatatgctgccata
gttgaatttgcacctttccaaaaagctgcaaaaaagaagagtaagaaaaaggatgccaaa
actggaactattgaagatgatccagagtacaagaagtttttggaaagttacagtgcagat
gatgagaaattaacttccactcctgaaactttgctggaggaaatagaagcaagaaacaaa
gagctaatagctaaaaagactactcctttattgaacttcttgaaaaataaacagaggctg
agagaagaaaaaagagaggagaggaggaggagagaattggaaagaaaaagacaaagagaa
gaagaaagaagaaaatggaaagaggaggagagaaggaagagaaaagaagcagaaaaactg
aagaaagtagacagatgcccagaaaaagagagagacagatcaaaagaagaaccaaagatt
aagctacttaagaagcctgaaaaagatgaaaaagacttggagaaaaaagaaaaatccaag
aaactggaaaaagagactctgagggaggaaaaaaatgcgagtagtgcatctgccaaacga
tctgatggggagacaaaagaagagaaggcaaaaaaatcagaagatgagtgtgtaaaggac
tacagggaccgagatagagattttgaaagagacagagaatatgagagagcacagagggag
aaacagagacgccaagaagaggagcgtcggaggcagagcgagcgctttgagaagcttttt
agaagaagagaggaagaggtgaaaaaggagagagacttaatcagagaaaagggaaagaaa
agtgatcttacagactttaccagcagcatggacaaatctgagaaagtaaccaaagacgat
aaaaaagaggatacaattaagagggatcgtatcagaaacaaggatcgtccggctatgcag
ctgtaccagccaggagcccgaagtcgaagcagactgtgtcagtatgaagacagtgctgcg
aagcccacagatcagggagtggataagaaacaagagcgtgagatcagtaatatgaaggaa
gaggagtga

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