Acinetobacter sp. DUT-2: A0J50_05745
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Entry
A0J50_05745 CDS
T04353
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
acw
Acinetobacter sp. DUT-2
Pathway
acw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0J50_05745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acw03019
]
A0J50_05745
Enzymes [BR:
acw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A0J50_05745
Messenger RNA biogenesis [BR:
acw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0J50_05745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
ERCC3_RAD25_C
YtzH
Motif
Other DBs
NCBI-ProteinID:
AMO40208
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All DBs
Position
1225548..1226699
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AA seq
383 aa
AA seq
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MTSGFETLNLHPQLKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPVQEQRFRGEPRALILAPTRELALQIESDAKFLTKFSNLHLVTLLGGVDFDK
QKKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SPRKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAKQDKYR
LLQDILREEPIDKVMIFANRRDQVRRLYDHLKKDGYRVGMLSGEIAQDKRLKMLEQFKQG
KHNIMIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGSQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacatctggttttgaaaccttgaatttacatccgcaacttaaaaaggcgattgatgct
ttagggtttactcaaatgaccccaattcagcaaaaggttttaaaatatacattagccggg
catgatgcaattgggcgagcacaaacaggaacaggtaagacagctgcctttctgattagt
gtaattaatgatttactcaataatccggttcaagagcaacgcttccgtggcgagcctcgt
gctttaatcttggcacctactcgtgagttggcattgcaaattgaaagtgatgcaaaattt
ctcacaaaattctctaatttacatttagtgaccctattgggtggtgttgatttcgataag
cagaagaagcaacttgatgctaattttgtcgatatcatggtagccacacctgggcgatta
atcgattttgtagaacaaaaagaagtctggctcgatcaaattgaatttttagtcattgat
gaagctgaccgtttattagacatgggctttattccttcggtaaaacgtattgttcgttat
tcaccacgcaaggaacaacgtcagacactcatgttctcagcgacgtttagttatgacgtt
ttgaatttggcaagacaatggttgtttgaacctgtaactgttgaaattgagcctgaacaa
aagaccaataacgatgtagaacaacgtgtttatgttgtagctaaacaagacaaatatcgt
ttactacaagatatcttgcgtgaagaaccaatcgataaggtcatgatttttgctaatcga
cgtgaccaggtccgccgtctttatgatcatttaaagaaagatggatatagagttggtatg
ctttcaggtgagattgctcaagataaacgtttaaaaatgttagagcaatttaagcaaggt
aaacataatattatgatcgcgacggatgttgctggtcgtggtattcatgtggatggcgtg
tcgcatgtaatcaactttacgttgcctgaacaatctgatgactatgtacaccgtattggt
cgtacaggtcgcgctgggtcacaaggggtaagtattagttttctttcagaagatgacgcc
ttttatttacccgaaattgaaaaagcaattggtaaaaaattaccactgaccagattagat
ggttactgctaa
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