Azotobacter chroococcum: Achr_23920
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Entry
Achr_23920 CDS
T03640
Name
(GenBank) RNA polymerase sigma factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
acx
Azotobacter chroococcum
Pathway
acx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Achr_23920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acx03021
]
Achr_23920
Transcription machinery [BR:
acx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Achr_23920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Rv2175c_wHTH
HTH_23
Sigma70_ECF
HTH_24
Terminase_5
HTH_31
HTH_IclR
HTH_3
HTH_11
DUF6031
HTH_Tnp_4
HTH_17
HTH_Tnp_ISL3
KORA
Motif
Other DBs
NCBI-ProteinID:
AJE21829
UniProt:
A0A0C4WMW5
LinkDB
All DBs
Position
2677706..2678230
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AA seq
174 aa
AA seq
DB search
MTASLPLPSALRLQVLHRLFGEHHGWLLGRLRARLGCAHDAADIASETFTQVVALEDPGA
IREPRALLTTIAKRLVYASWRRRDLERAYLEALAQQPEAVQPSAEETVLVLEALTAIDQL
LDGLSPKARAAFLYSQLEGLTYAEIATRLGVSVTRVHQYVVKGLTTCYLALEPA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctccctgccactgccctccgcgctgcgccttcaggtcctccatcgcctgttc
ggcgagcatcacggctggctgctcgggcgcttgcgcgcccggctcggctgcgcccacgac
gccgccgacatcgcctcggaaacctttacccaggtcgtcgccctggaggaccccggcgcc
atccgcgagccgcgcgccctgctgaccaccatcgccaagcgcctggtctacgccagctgg
cgccgccgcgacctggagcgcgcctatctggaggccctggcgcagcagccggaggccgtc
cagccgtctgccgaggaaaccgtcctggtcctcgaagccctgacggccatcgaccagctg
ctcgacggactttcgccgaaggcccgcgcggcctttctctacagccagctggaaggcctg
acctacgcggagatcgccacgcgcctgggggtgtccgtcacccgcgtgcaccagtacgtg
gtcaaggggctgaccacctgctacctggcactggagccggcatga
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