Anser cygnoides domesticus (swan goose): 106029432
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Entry
106029432 CDS
T04896
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
acyg
Anser cygnoides domesticus (swan goose)
Pathway
acyg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106029432 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyg03021
]
106029432 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106029432 (SUPT5H)
Transcription machinery [BR:
acyg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106029432 (SUPT5H)
RNA polymerase I system
106029432 (SUPT5H)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106029432 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
106029432
NCBI-ProteinID:
XP_047912049
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MEGFGGVQPSLTLFFTTYPPRIVAQAEEERASAAGSEKEEAEEEEEEEEYDEEEEEEDDD
RPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARR
LQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKC
KIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGN
LRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQIS
LKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGN
RYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGD
NVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGR
FEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDP
QTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVID
GPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVAGFTP
MSPRITSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATE
STARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGS
QTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQ
GYGGTPNPQTPGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQ
SYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPG
SGIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEH
LEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtttgggggtgtgcagccttctctcaccctctttttcaccacctaccccccc
cgaattgttgcacaggctgaggaggagcgcgccagcgcggccggcagcgagaaggaggag
gccgaggaggaggaggaggaagaggagtacgatgaggaggaggaggaggaagatgacgac
cggccagccaaaaaaccccgccatgggggcttcatcctggacgaggccgacgttgatgat
gagtacgaggacgaggaccagtgggaggatggggccgaggacatcctggagaaagaagag
atcgaagcttccaacatcgacaatgtggtgctggacgaggaccgctcgggcgctcggcgg
ttgcagaatctctggagggatcaacgcgaggaggagctgggcgagtattacatgaagaaa
tacgccaagtcctcggtgggagagactgtttacggcggctccgatgagctctcggatgac
atcacgcagcagcagctgctgcctggagtcaaggatcccaacctctggactgtgaagtgc
aagatcggcgaggagcgcgccacggccattgccctgatgcggaaattcatcgcttaccag
ttcaccgatacgcccctgcagatcaagtcggtggtggcccccgagcacgtcaagggctac
atctacgtggaggcgtacaagcagacgcacgtgaagcaggcgatcgagggcgtgggcaac
ctgcgcatgggctactggaaccagcagatggtccctatcaaggagatgacggacgtgctg
aaggtggtgaaggaggtcaccaacctcaagcccaagtcctgggtgcgcctcaagaggggg
atctacaaggacgacatcgcccaggtggattacgtggagcccagccagaaccagatctcc
ctcaagatgatcccccgcatcgacttcgaccgcatcaaagcccgcatgagcctgaaggac
tggttcgccaagcgcaagaagttcaagcgccccccccagcggcttttcgatgctgaaaag
atccgctccctgggaggcgacgtggcgtcggatggagacttcctcatctttgaaggcaac
cgctacagccgcaagggctttctcttcaagagcttcgccatgtcggccgtgatcacggaa
ggcgtgaagcccaccctgtcggagctggagaagttcgaggaccagcctgagggcatcgac
ttggaggtggtgacggagagcacagggaaggagcgtgagcacaacttccagcccggcgac
aacgtggaggtgtgcgagggcgagctgatcaacctgcagggcaagatcctcagcgtcgat
ggcaacaagatcaccatcatgcccaaacacgaggacctgaaggacatgctggagttccca
gctcaggagctgcgcaagtatttcaagatgggcgaccacgtgaaagtgatcgcggggcgt
ttcgagggtgacacgggcctcatcgttcgggtggaggagaactttgtcatcctcttctct
gacctcaccatgcacgagctcaaggttctaccgcgggacctgcagctctgctcggagact
gcctcgggcgtggacgttggggggcagcacgagtggggtgagctggtgcagctggacccc
cagaccgtgggcgtcatcgtccgcctggagcgcgagaccttccaggtgctgaacatgtac
gggaaggtggtgacggtgcggcaccaggccgtcaccaggaagaaggacaaccgcttcgcc
gtcgccctcgactcggagcagaacaacatccacgtcaaggacatcgtcaaggtcatcgac
gggccccactcgggccgtgagggggagatccggcacctcttccgcggctttgccttcctg
cactgcaagaagctggtggagaacggcggcatgtttgtctgcaagacccgacacctcgtc
ctggccggtggttccaagccacgggacgtcaccaacttcacagtggctggctttactccc
atgagcccccgtatcaccagcccaatgcaccccagcggggctggccagcgcggcggcttt
ggcggcggcggcatgagccgtgggcgcgggcggcgggataacgacctcatcgggcagacg
gtgcgcatctcccaaggaccttacaaaggctacatcggggtggtgaaggacgcaacggag
tcgacggcccgcgtggagctgcactccacctgccagaccatctcggtggaccgccagcgc
ctgaccacagtgggctcgcggcgccctggtgggatgacatcgacctatgggcgcaccccg
atgtacggctcccagaccccgatgtacggctcgggctcccgcaccccgatgtacggctcc
cagacgcccctgcatgacggcagccgcacgccacactacggctcacagaccccgctgcac
gacggcagccgcacgcctgcccagagcggtgcctgggaccccaacaaccccaacacgcct
tccagggccgacgaggactttgagtacggcttcgacgatgagcccacgccctcaccgcaa
ggctacggtggcacccccaacccgcagacccccggctaccccgacccctcatccccacag
gtcacccagccgtacaacccccagacccctggcacgccggccatgtacaacaccgaccag
ttctccccctacgccgtgccatcgccacagggctcctaccaacccagccccagcccccag
agctaccaccaggtggcccccagccccgtgggctaccagaacacccactcgccggccagc
taccaccctacaccatcgcctatggcctaccaggccagccccagccccagcccagtgggg
tacagccccatgacccccggggcgccatccccgggggggtacaacccccacacccccggt
tcgggcatcgagcagagctccagtgactgggtgaccaccgacatccaggtgaaggtccgg
gacacctacctggacagccaggcggtgggacagacgggcgtcatccgcagcgtcacgggg
gggatgtgctccgtgtacctgaaggacagcgagaaggtggtgagcatctccagcgagcac
ctggagcccgtcacccccaccaagagcaacaaggtgaaggtgatcctgggtgaggaccgg
gaggccaccggcatcctgctcagcatcgacggcgaggatggcatcgtccgcatggacctg
gatgagcagctcaagatcctcaacctgcgcttcctgggcaagctcctggaggcctga
DBGET
integrated database retrieval system
