Anser cygnoides domesticus (swan goose): 106045470
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Entry
106045470 CDS
T04896
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
acyg
Anser cygnoides domesticus (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyg03000
]
106045470 (SOX5)
Transcription factors [BR:
acyg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106045470 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Cob_adeno_trans
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
106045470
NCBI-ProteinID:
XP_047902723
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MEFGAEETLVALPGRFTALCGKQELTVRPTEMSSKRPASPYGEADGEVAMVTSRQKVGEE
ESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQENCGHRTPTSQHNTMEVDGNKVMSSFA
PHNSSTSPLKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEET
PSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDE
QKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIP
VFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQL
YAAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKP
KTSDGKSPTSPTSPHMPTLRINSGASSLKSSVPATLASPSARANTIDILSSITSSGYLND
HDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKDKTTLETLTQQLAVKQ
SEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERR
KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT
CLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLP
SEHSSVSSSPEPGMPVIQSTYGIKGEEPHIKEEMQTEDVNGEIYDEYDEEEDDPDVDYGS
DSENHIAGQAN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggagccgaggaaactttggtggcgttgccaggccggttcacagcactttgt
ggaaagcaagagctaacagtgagaccgacagagatgtcttccaagcgaccagcctctccg
tatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtgggagaagag
gagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaacaagcct
cactctgaggaatttcagccagtttctctgctgacgcaagagaactgtggccataggact
cccacttctcagcacaacacaatggaagttgatggcaataaagtgatgtcttcatttgcc
ccgcacaactcatctacctcacccttgaaggcagaagaaggtgggcgtcagagtggagag
tcattgtccagcacagccctgggaacccctgaaaggcgcaaagggagcctagcggatgtt
gtagacacccttaagcaaagaaaaatggaagagctcatcaaaaatgagccagaagaaact
cccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgccatgggatca
gggaactttggagaaataaaagggactccagaaagcctcgctgagaaagaaaggcagctc
atgggtatgatcaatcagctgaccagtttgcgagaacagctgctagcagctcacgatgaa
cagaaaaaactggctgcatcgcagatcgagaaacaacgccaacaaatggagctggctaag
cagcaacaagaacagattgcaagacaacagcagcagctcctgcagcagcaacacaaaatt
aaccttcttcagcaacagatccagcaggtccagggtcagctgcctccattaatgattccc
gtattccctccagaccaacgaaccctagcagcagctgctcagcaaggattccttcttcct
cctggtttcagctacaaagcgggatgcagtgacccctaccccgttcagctgatcccgact
accatggcagctgctgctgcagcaacgccgggcttaggcccgctccaactgcagcagttg
tatgctgcccaacttgctgcaatgcaagtgtctccgggaggcaagatacctggcataccc
cagggtaaccttggtgctgctgtatcgcctaccagcatccacacagacaagagcacaaac
agccctccacccaaaagcaaggatgaagtggcccagcctctgaacctttcagccaaaccc
aagacatctgatggcaagtctcccacgtcacccacctctccacatatgccaactctgaga
ataaatagtggggccagttcactaaaatcctctgtgccagcaacattagctagtccttcg
gccagagctaacacaatagacatcctttcttctatcacgtcgtcaggttatttaaatgac
cacgatgctgttaccaaggcaatccaggaggcccggcagatgaaggagcaacttcggaga
gaacaacaggtgctggatgggaaggtggctgttgtgaatagcctgggtctcaataactgc
aggacagaaaaggacaaaacaacactggagaccctgactcagcagctggcagtaaaacag
agtgaagatgggaagtttagccacgcgatgatggatttcaacatgagtggagattctgat
ggaagtgcaggagtttcagaatctagaatttatcgggaatccagagggcgtggtagtaat
gagccccatatcaagcgcccaatgaatgcattcatggtatgggctaaagatgaacggagg
aagatccttcaagcctttcctgacatgcacaactccaatatcagcaagatactaggatct
cgctggaaagctatgacaaacctagagaagcagccatactacgaggaacaggcccgactc
agcaaacagcacctggagaaatacccagactacaaatacaagccaaggccgaagcgtacc
tgccttgtagatggcaaaaaattacgcattggcgagtacaaggctataatgcgcaacaga
cgccaggagatgaggcagtattttaatgttgggcaacaagcacagattcccattgccacc
gcgggcgtagtttacccaggagccatcgccatggcaggaatgccttccccacacctgccc
tctgagcactcgagcgtctccagcagtccggagcctgggatgcccgtcatccagagcact
tacggcatcaaaggcgaggagcctcacatcaaggaagagatgcagaccgaggatgtcaat
ggagaaatctacgatgagtatgatgaggaagaggatgaccctgatgttgactatggcagt
gacagtgaaaatcacatcgcggggcaagccaactga
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