KEGG   Acropora digitifera (stony coral): 107332074
Entry
107332074         CDS       T04352                                 
Name
(RefSeq) DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107332074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adf03400]
    107332074
Enzymes [BR:adf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107332074
DNA repair and recombination proteins [BR:adf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107332074
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme zf-CCHH CDC45 Itf52_C GOLD_2
Other DBs
NCBI-GeneID: 107332074
NCBI-ProteinID: XP_015752288
LinkDB
Position
Un
AA seq 702 aa
MALTVVTKSAQTSPSPKKKTVQSRLTSKPSTSSKPSLEHKQAASSGGGKEGSSPVKSGKS
DERSQDDAFREFRKICLKLAEEPSYNAKSKILADFFSKGSSGELQRYVYCCVANYFFTVF
IFKIDLFLDKLKNFTKEDDQLRELTKITKRCSANDLRYIIRLIKHDLRMNTGAKHVLDAL
DPDAYAAFQASNDLADVVQRCLKKKQTKPVGALPGMSKKLSIRATLMTPVKPMLAEACKS
FSQALKKCPSGMFAEIKYDGERVQVHKSGNDFQFFSRSLKPVLGHKVAPVKDYLPKACPH
GNSLILDSEVLLVDTKTAKPLPFGTLGIHKKSAFKDASVCLFIFDCLQFNDENLMQKSMK
ERRQILEANVTVIPNKIMLSETNFLKTEKELSKLMTRAMTEGLEGLVLKDVNGIYEPGKR
HWLKMKKDYLEEGAMADTADLVVLGAYYGTGNKGGLMSIFLMGVWDPATKQWCTVAKCGN
GHDDKTIEKLNKQLKMKKISKDPAKVPSWLNIHRSLVPDFVIEDPKKAPVWEITGAEFSK
SNVHTADGISIRFPRVTRIRDDKDWKTANDLPHLKVLFKNSARTSNDAKVQNEEDDDDDN
GDDSNGKEVHSKDVEMKDGNAEKATSPKADSRKRKAPENNEKGSPNKKSKPLGKYREDCY
QGNAEHRQKFSQPEEGEKYISQGNNKASIAAVCYGFLRPLIS
NT seq 2109 nt   +upstreamnt  +downstreamnt
atggctttaactgtggttacaaaatctgctcagacatctccttcacccaagaagaaaaca
gtacaatccaggctcacatcaaaaccttccacgtcatccaaaccctcgttagagcataaa
caagcagcttcatctggtggcggcaaggaaggttcttcacctgtaaagagtggaaaatct
gacgagagaagccaggatgatgcatttcgagagttcaggaagatttgcctcaaacttgca
gaagaaccaagctataatgcaaagagcaaaattttggctgacttcttttcaaaggggtca
tctggagagttgcagagatatgtgtactgttgtgttgcaaattattttttcactgtgttt
attttcaagatcgatttattcctggataagctgaagaactttacaaaagaagatgatcaa
ctaagagaattgacaaagataacgaaaaggtgttctgcaaatgacctcaggtatatcatt
cgactgatcaaacatgatttgcgcatgaacacaggagcaaaacatgttttagatgccctt
gatccagatgcgtatgcagcttttcaagcatccaacgatctggccgatgttgttcaacgt
tgcctgaaaaagaagcaaactaaaccagtgggtgctttacctggaatgagcaaaaaactg
agtattagagccacactgatgacacctgtgaaaccaatgttggctgaagcttgtaagagt
ttttcacaggcattaaagaaatgcccgagcgggatgtttgcagagataaaatatgatggt
gagagagtacaggttcacaagagtgggaatgacttccagttttttagccgcagtctcaag
ccagtgcttggtcacaaggtcgctccagtcaaagattatcttcccaaagcttgtccccat
ggaaacagcctgatattggacagcgaagtgttgcttgttgataccaagacggcaaagcct
ctcccatttggtacgctgggaatccacaaaaaatctgcttttaaagatgccagcgtttgc
ttgttcatctttgactgtctccagttcaatgacgagaatctcatgcaaaagagcatgaag
gaaagacgccaaatcttggaggcaaacgtgaccgtcatccctaacaaaataatgctctca
gaaacgaatttccttaagacagaaaaggaactgtcgaagctgatgacaagagccatgaca
gaaggtcttgaaggacttgtactcaaggatgtgaatggtatctatgaaccaggaaaaagg
cattggctaaagatgaagaaagattatcttgaagaaggtgccatggctgatactgctgac
ctggtggtgttgggggcgtactatggtaccggaaacaaaggagggttaatgtccatcttt
ctgatgggagtttgggatccagctacaaagcagtggtgtactgtggccaagtgcggaaac
ggacacgatgataaaactattgagaagctaaataaacagctcaaaatgaagaaaataagc
aaggacccagccaaagttccttcatggctcaacattcatcgcagtttagttcctgacttt
gttattgaagatcctaagaaagcccccgtctgggagataacaggagcagagttcagtaaa
tcgaacgttcacacggctgatggaatttcaattcgttttccgagggtcacgaggattaga
gatgacaaggactggaaaacggctaatgatttgccgcatctgaaggtcttgttcaagaat
tcggcaaggacatctaacgacgccaaagtacagaacgaggaggatgacgacgatgataat
ggtgacgatagcaatggaaaggaagtgcattcaaaagatgtagaaatgaaagatggaaac
gcagaaaaagccacgagtccaaaagcagacagcaggaaaagaaaagcgcccgagaataac
gagaaaggatcgccgaataaaaagtcaaagcccttgggtaaatacagagaagattgttat
caagggaacgcggagcaccgccaaaaattctctcaaccggaggaaggcgagaaatacatc
agtcaaggcaataataaggcaagtattgcggcagtgtgctatgggtttttacgacctctc
atttcttag

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