Acropora digitifera (stony coral): 107335447
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Entry
107335447 CDS
T04352
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03022
Basal transcription factors
adf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107335447
09124 Replication and repair
03420 Nucleotide excision repair
107335447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107335447
03400 DNA repair and recombination proteins [BR:
adf03400
]
107335447
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107335447
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107335447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
SinI
ANT
Motif
Other DBs
NCBI-GeneID:
107335447
NCBI-ProteinID:
XP_015755953
LinkDB
All DBs
Position
Un
AA seq
468 aa
AA seq
DB search
MAANSLSGSSFFRHLQCRDLHQYLGSLASGILDRLYNHPAICLAVFRELPELAKQFVMRT
LFAEQPVPETLVAAWVKSDHQKPYTGAMNRLKSLRIWREASGGVPNRLEMNAIFRSNLKI
ALCGGGNPWIGSGDQPEKDKHARDIPFLDKYSMERWEAVLHFMTGCTATDEKTPVSQDVV
KVLVLSGLMKCETPGSTPVISPAGFQFLLMDTASQVWYFMLQYLETVEGRDMDLVECLSF
LFQISFETLGKDYSTEGMSESQFKFLQHLREFGLVFQRKRKSRRYYPTRLAINLASAGIG
SSAVTHSDEKGFIVVETNYRLYAYTGSSLQVALVGLFAEIVCRFPNLCVAVLTRDSVQQA
LASGISAEQILHFLRTRAHPEMLKKNPVIPPTISDQIRLWELERSRMKFTEGVLYNQFLS
QADFEILRKYAEDLGVLMWANSSKRVIVVSRSGHDDVKRFWKRQKQNT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaactctttatctggatcttcgttttttcgtcatttacaatgtagagatctt
caccagtatttaggaagtttggcctcaggaatattagataggttgtataatcacccggca
atatgcttggctgttttcagggagttaccagaacttgcaaaacagtttgtaatgaggact
ttgtttgcagaacagccagtcccagaaacattggtagcggcatgggttaagagtgatcat
cagaaaccctatacaggagctatgaatagactcaagtctctcaggatttggagagaagca
agtggtggagttccaaaccgacttgagatgaatgcaatatttcgcagtaatctcaagatt
gcactttgtggaggaggcaatccttggataggttcaggtgatcaaccagaaaaggacaag
catgcacgagacattcccttccttgataagtacagcatggaaagatgggaggccgtcctt
catttcatgactggttgtactgcaactgacgagaagacaccagtcagtcaggatgttgtc
aaggtgttggttctctcaggtctcatgaaatgtgaaacaccaggtagcacccctgtaata
agtccagcaggattccagtttcttttgatggacaccgcttcacaagtgtggtactttatg
ctacaataccttgagacagttgagggacgagacatggatcttgtggaatgtctttcattt
ctgttccagattagctttgaaactcttggaaaggactattccacagaaggaatgagtgaa
tcacagtttaaatttcttcaacatctgagagagtttgggcttgtgtttcaaaggaagcgt
aaatcaagaaggtattacccaacaagactggcaatcaatttagcatcagcgggaatagga
agctccgctgtcactcattcagatgagaagggcttcatagttgtggaaaccaattatcgc
ctttatgcttatacaggatcgtctttacaagttgctctggttggattgtttgctgaaata
gtctgcagatttcccaacctttgtgttgctgtgttaacaagagacagcgttcaacaggcc
ttggcaagtggtatctctgctgagcagattcttcatttcttgcgtacgcgagcccatcca
gagatgctaaagaagaaccctgtaattccaccaacaataagcgatcagatccgtctgtgg
gaactggaaaggagtagaatgaagtttacggaaggtgtactatacaatcaatttctctca
caagctgatttcgaaatccttaggaagtacgctgaggatctaggtgttctgatgtgggca
aattcatcgaagagagttattgtggtcagccgctcaggtcatgacgatgtgaaacggttt
tggaaaagacaaaaacaaaatacgtga
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