Acropora digitifera (stony coral): 107343042
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Entry
107343042 CDS
T04352
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107343042
04121 Ubiquitin system [BR:
adf04121
]
107343042
Enzymes [BR:
adf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107343042
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107343042
Ubiquitin system [BR:
adf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107343042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-B_box
DUF5128
Filamin
SGL
zf-RING_UBOX
Invasin_D3
PhoX
zf-RING_5
zf-C3HC4
ASD2
DUF4449
His_Phos_2
Baculo_PEP_C
Exonuc_VII_L
P4Ha_N
zinc_ribbon_4
Motif
Other DBs
NCBI-GeneID:
107343042
NCBI-ProteinID:
XP_015764050
LinkDB
All DBs
Position
Un
AA seq
752 aa
AA seq
DB search
MAKLRNKVKFADEMRPKAADIACPSCQKRFVFPVLLPCLHTICKNCMANEKLAASKNGRL
PHCLVCSQSFDIRKEFPLNFVANNMVNLAAVRDNASLNFACDSCETEGEKVTMRCNECQL
FLCEFCTTAHRRISATKKHILQPVEHLKGQISKGSILTSPSFCSVHSSERLCSYCQTCNE
IICRECSVTRHKEHELSKTEEAAKTLKVNMVNLVEQVKGKLKHLSGQVTTIKQEISSSED
HKRKVCSTVEQYFKVIINALNNRMNELVNEVETLCATKFELLFSKQKKLEQTAQHADSCC
LFTETAVKQGGELEILSVGDIVIQQLTALIEETERLSPRQESEGSVKLIEFVGEQEKIIN
DINHLGNIKEKTLSTPCEPTLCILSSAKQHQHVITGEVNRMSLTAFNRQGKKQQRGGDKV
KLSFSLASSRVTPDSAGFKYGCQDNKDGTYTLAYVITKPDTYWLHVSVNGCPVADSPVTV
TVRPRDWVGTHLILPSEDCGGFSHPYSVLADAHDHVVVADSHNHRIKILSLKGEVLKTFG
SQGTVEGQFNFPYCLALSRKGNLIVVSDGQNHRVQVVTPSGKLARSFGGFGDEVGRLNHP
HGVAIDESDRIYVADSGNSRIQIFSHEGIPLGMILHKDMACPWGVAICRTGHIAVTDYNN
HKVCIFNEDGSLYLQFGSRGDGNGLMNNPAGITVDDQGQIVVADRSNHRVQIFQQNGSFV
TKFGGKGQGDGLMRFPAGVAVDKRGHLYVADT
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctacgaaataaggtaaaattcgccgatgaaatgcggccaaaagctgctgat
atagcatgtcccagttgtcagaagaggtttgtcttcccggtccttttaccatgtttacat
accatctgtaaaaattgtatggctaacgaaaaacttgcagcgtcaaaaaatggcaggcta
cctcactgcctagtttgttcacagtcttttgatatacggaaagaatttcctctcaatttt
gttgccaacaacatggttaatttagcggcagttcgtgataatgcttccttaaattttgcc
tgtgacagttgtgaaacagaaggcgaaaaagttacaatgcgatgcaatgagtgtcaattg
tttctttgtgaattttgtacaacggcgcaccgtaggattagtgcgaccaaaaaacacatc
ctacaaccagttgaacacttgaaagggcaaatttctaagggaagtatcctaacgagccct
tcattttgctcagttcactcatccgaacggctttgtagttattgccaaacgtgcaacgaa
attatatgtcgtgagtgttctgtaacacgacacaaagaacacgaacttagcaaaacggag
gaggcggcaaaaactctgaaagttaatatggtgaatcttgtagagcaagtgaaagggaaa
ctgaagcatttaagtggacaagtcaccactatcaagcaagaaatttcgagttctgaagat
cacaaaaggaaagtttgcagcactgtagaacaatacttcaaagtgataattaacgcactt
aataatcgcatgaatgaacttgtaaatgaggtagagaccctttgtgctacaaagtttgag
cttttgttctcgaaacaaaagaaacttgagcagaccgctcaacacgctgacagttgttgt
ttgttcacggagactgcggttaagcaaggaggcgagttggaaatcttaagtgttggagat
attgttattcagcaactaactgcgctcattgaagaaacagaaagactttcaccacgtcag
gaatcggaaggttccgtcaaattgattgaattcgttggagagcaagaaaaaataataaac
gacattaaccatttgggtaacataaaagagaaaactttaagcacgccttgtgagcctaca
ctctgcattttgtcctcagccaaacaacaccaacatgtaatcactggagaggtgaatcga
atgtctttgacagccttcaatcgtcaaggcaagaaacagcaaagaggcggagacaaagtg
aagctctctttctcattggccagctctcgagtgacacctgacagcgctgggtttaaatac
ggttgccaagacaacaaggatggaacgtacaccttggcatacgtcatcactaaaccagat
acgtattggttacacgtaagcgtaaatgggtgccctgtggcagatagcccagtaacagtc
acagtacgaccaagagattgggttggcactcatcttatcctgcccagtgaagattgcggg
gggttttcccatccgtacagtgtgcttgctgatgcccacgatcatgtagtggtagctgat
tctcacaaccacaggatcaaaattctatctttgaaaggtgaagttctcaaaacgtttgga
tcccaaggaacagttgagggccagtttaattttccatattgcttagctttgagtcgaaaa
ggaaacctcatcgttgtttccgatggtcagaatcatcgggtgcaagtcgtcacaccttcg
ggtaaacttgccagaagcttcggagggtttggtgacgaggttggtagactaaatcatccc
catggcgttgctattgacgagagtgatcgcatttatgtggctgactcagggaatagtcga
attcagatcttctctcacgagggaattcctcttggcatgatattacacaaagacatggct
tgcccgtggggggttgccatatgcagaacaggtcacatcgcggtaactgattacaacaac
cacaaagtgtgtatcttcaacgaagatggttccctttatcttcaatttgggtcccgagga
gatggaaacggtctaatgaataatcccgcgggaattacagtggacgatcagggacaaatt
gttgtggccgatagaagcaaccacagagtacagatatttcaacagaatggatcatttgtg
accaaatttggaggaaaaggtcagggcgatggattgatgcgatttcccgcaggagtggct
gtggacaaaaggggacatctttatgtagcggacaca
DBGET
integrated database retrieval system
